| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2015 |
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| Symbol | |
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| ID | 4483336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 2494863 |
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| End bp | 2500094 |
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| Gene Length | 5232 bp |
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| Protein Length | 1743 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639722758 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_865922 |
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| Protein GI | 117925305 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.724661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.480876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTTT TTGAGTTCCG CAAACGGCTC GTTTCTGAAT ACGAGCAGTT CTCCCGCAGC
TTCAGCAAGA TCAAAGCTGA AGACATGCGA GACCACGTGG ATGCCGAATA CAGGAATGGC
CGTTTTTGGC CTGCTCCCCT CGTTCAACTG AACCCGAGTT TTGTTTCAGG AGGCTGGATC
GACGGATTGG TTTCAGAAGG CCTGCTCCAT TCAGAGTGCA GAAGCATCTT CCGCGTCCAA
AAAGGTTCTG GGGAGATGGG CTTCCCCATG AAGGTGCATA AACATCAAGA AGAAGCCATC
CGGATTGCGC AGCGTGGCGA GAGCTATGTC CTGACCACCG GAACAGGATC GGGCAAATCC
CTTTCATACT TCATTCCTAT CGTGGATCAC GTCCTTCGCC ACAAAGAGGG CAAAGGGAAA
CCCGGCATTT CAGCCATCGT GGTCTACCCG ATGAACGCGC TGTGCAACAG CCAGATGGAG
GAACTGGATA AATTCCTTCG AGCTGGTTAC GGCAAGGATC AGGAGCCTGT CACATTCGCG
CGCTATACCG GCCAGGAATC CAAAGAGGAG CGGCAAAGGA TCGCTGAATC CCCACCGGAC
ATCCTGCTGA CCAACTATGT CATGCTCGAA TTGATCATGA CGCGCCATGA TCCTGCCGAC
CAGGCGGTAA TCAAGCACGC TGCTGGACTG CGATTCCTGG TTCTGGATGA GTTGCACACC
TATCGGGGCC GGCAAGGCGC TGATGTAGCC ATGCTCGTCA GAAGGGTCCG GGAACGGCTG
AACGCCGACC TGCTCTGCGT AGGGACTTCC GCCACCATGG CCAGTGAAGG TACTGCGGCA
GATCGGAATC GAGTCGTTTC CGATGTCGCC AGCCGTTTGT TCGGCTCTCA GGTCAAGCCT
GAAAATATCG TCACCGAGAC CCTGGAGAGG GCTACGACTT CGGACTTCAC GACGGGCGAA
CTCGCGAACG CAGTGCAAAA TGGCGTCCCT GCTACCACAA CCTTCGAGGA CCTCCAGAAG
CACCCGGTAG CCGTCTGGGT TGAACTCAAT CTCGGGTTGG AGCATGAGGA CGGGAAACCC
GATGGAAAAC TGGTTCGGTT CTCTCGCCCA CGAACCCTCC GTCAAGCTGC CGAAGCATTG
GCAGGTGAAA CCGGCCTCCC CGCGGACCAG TGTGAAACCT ATCTCGCCCG CTTCCTACTG
TTGGCATTTC ATACCAAGGA CGACAACGGG AAGCCCCTGT TAGCATTTCG GTTGCACCAG
TTCATTGCTG GTGCCGGGAA TCTATTCGCC ACCCTGGAGC CTGTGAACCG CCGGTACATC
ACGGTCAACG GTCAGCAATT CCAGCCTGGT GAGCGGGACA AGCTCCTTTT CAACACCGTC
TTTTGCCGTG AATGCGGACA GGAATATTTT CCCATTTGGG CCACCATTGA GAACAAGCAT
CCCGTCTCCA TCTCACCCCG GGAGCTGTCT GAGCGCGCCA ATGAAGATGA TGACGTTCAG
TTCGGTTTCT ACATGCCGGA CCCGGATGGT TTGTTCGACC CATCCGGGGT GGAAGACCAC
TTCCCCGAAG AGTGGCTGGA TTTCGAACGG GGGGATGCAC GCCTGAAACC CTACTATCGG
CGCTACAAAC CCGTTTCCCT CAAGGTCAAC ACCAAGGGGG AATCTGGCGC TGAAGGTATG
CCCGGCTGGT ACATCCCGGG TTCATTCCGC TTCTGCCTTC ATCCAGAATG CGGCGTTAGC
TACGACGGAA GCGTCCGCAG TGATCTGACC AAACTGTCAT CCTTGAGCAG CGAAGGGCGC
AGCTCCGCCA CGACCATGCT CACGTTGTCC TCCCTGCGCT ACCTTCTCGG CGAAGCAGAA
GGCCTGGGGG CGGAAGCCAG AAAGCTGCTC GGATTCAGTG ACAATCGCCA GGACGCCTCT
CTCCAGGCAG GCCATTTCAA CGATTTCATC CAGATTCTCC TGCTACGTGG CGCTTTGCTC
GCGGCGATCC AAAACGAGCC TGATGGCGTT TTGCGGGATG ACGCCCTGAC CCAACGGGTT
GTCGAACACC TGCGATTGGA AGCCGGCGAC TTTTCATCAA ACCCCGATGC CAAAGGAGCC
AAAGCGCTCA ATACCGAGAA AACGCTCCGC GATGTGATTG GGTATCGCTT GTACCACGAT
CTGCGCCGTG GATGGAGAAT CACCAATCCC AACCTGGAGC AGCTACGTCT GCTCAAGATT
CACTACCAAT CCCTTCAGGA GTGCGCTCAG GACCAGGATG AATGGTCCCA GTGCCACCCT
TTGCTGGCCA ATGCCACCCC GGAACTGCGT GAGTCACTGG CTCAGGAGTT GCTCGACACC
ATGCGACGGG GGTTGGCCAT CAAGACCATC TACCTGGATC CGAACTATCT CGAACAAGTC
AGGAACCGGA GCTTTTCTGA CCTGAAGGAG CCTTGGGGCC TTTCCGAGGA TGAACGCCCC
GTCACAGCTT CCGTCATGCT TCCTCGCCCG AAGAAGCAGG CAAACAGGTA TGATTTCCCG
ACCGTTCATA TCTCTTATCG GTCACGGTTC GGGTCTCATT TGAAGAGCCA GGCCACATGG
GGGCCTGGCA ATCCCGCATT CCCGAAAAAG TTTAATGAAG AGATCTACAA TGAGTTGATC
GATGGCATGC TCAGGGTGCT GGAGATCTAC GGCCTTGTTG AGCCTGTTGA ATTAAGCAAG
GACGACCGTG GATACCGTGT GGGAGCTAGT GTTCTCGAGT GGTCCATAAA CCAATCCCCG
GAAGATGCTC CAGCCGCCAA GGGGTTCAAG GAGACCGACA ACGCATTCTT CCGCACGCTC
TATTTGAACG TTGCGGGCCA GTTGCAGGAG AAAGACCGTT TCCTCCACCA GCTTGAGGCG
CGTGAGCATA CCGCTCAGGT GGACAGCAGC ACCCGTGAAG AGCGTGAAAA CGCCTTCCGT
TCGGCCAAAC TGCCTGTGCT GTTCTGTTCC CCCACCATGG AACTCGGGGT GGATATCTCC
TCCCTGAACA CCGTCTTCAT GCGCAATGCC CCTCCGACAC CCGCAAACTA CGCTCAACGT
AGCGGACGGG CCGGGCGCAG TGGGCAACCC GCATTGGTCA TTACCTACTG TGCGGCCCGT
TCCCCCCATG ACCAGTATTT CTTCACCGAC CCTACCCGCA TGGTTGCTGG CAGCGTCAAC
CCGCCAATGA TCGATCTGGC CAACGAGGAG TTGATCAAGA GCCACCTGCA TTCGGTTTGG
TTGGCGGAAA CAGGACAGAA ACTGGGAACG TCGGTCAAGG ACGTGCTCAA CCTGGAGATG
CCGGATTCAT TGCCGGTACG GGATGACTTG GCCACTTTCA TGGATACTCC GGCCGTGCGT
GAACGTGCCG CCAAGCGCGC AATTTCCATT CTGGCGATGG TTGAGAATGA ACTGACGGAA
GAAGTCGCTC CATGGTATGG CTCTGAATGG CAGAACAACG CCATCCATGC CTCCTTCCAG
CAATTCAACC AAGCGTTTGA GCGTTGGCGC TCCCTCTACC GGGCCACCAC CAAGCAGATG
GAAAAAAGCC ACGCCGTTCA GATGAATGCA GCAGCCACGG AAAAAGACCG AAAGGAAGCC
AAACAGCGTT ATGACGAGGC TCGGGTGCAA CAGGAACTGC TGCTTGATAC CCGAACCACC
ATGAATTCGG ATTTCTACAC CTACCGTTTC CTGGCCAGCC AAGGATTCCT GCCCGGGTAC
AACTTCCCCC GGCTCCCTTT GATGGCCTTC ATCCCCGGTC GCCGGGAAAA GGTTGGCAGG
GATACATTCC TCAGCCGGCC CCGCTTCCTG GGGCTGTCCG AGTTCGGCCC CCAGTCCATT
ATTTACCACG AAGGAAGCAC CTATCGGGTT CGCAAGGCCA TTCTCGGCAT CAAGGATGAG
GACAGCGTTT CCACTTCCGC TTCACTGCCC GTTCAGATCG CCCGGCTTTG CCCCGCCTGC
GGCTATGGGC ACTTTGGCGA CCAGAAGGAG TTTGAGCTGT GCGTCAATTG CGCTGAGCCT
TTGGAGGGCG GCCGCAACTT GGTCAGCCTC TATCGCATTG AGCAAGTTAG CACCCGGCGC
GCCACCCGAA TCACTTCCGA CGAAGAAGAG CGTCAACGCC AGGGGTATGA GACCATCACC
ACGCTGCGTT ATGCGGAGGA AAATGGTCTG CCACGCTTCA CTCCCCTCAA AGTCTCAGAA
GGAAGTGACG ACCTCCTGGA AATCCGCTAC GGCCCCTCAT CCACGCTGTG GCGCATCAAC
CTGGGGTGGC GGCGCCGTAA GGAGAAGTCC ATCTACGGCT TTAACATCGA TGTCACAAGC
GGCATCTGGT CCAAGGACGA ACAAGCCCCG GAGGATGTGG ATGACAGCGT CGAACAGGGC
AAGACGGTTC AGCGCATTAC GCCCTATGCC GAGGACCGGC GAAACATCCT GATCCTGCAA
CCCAAGGAAA TGTTGGACGA GGCCTCCATG GCCACGCTCC AGTATGCTTT CAAACGCGGT
ATTGAGGCTG CCTTCCAGCT TGAAGAGAGC GAACTGGCCG CCGAGCCACT TCCCGAGCGC
GGCCGCCGCA ATGCCATCCT GTTTTTTGAG TCTGCCGAGG GAGGCGCTGG CGTTCTGACC
CGTCTGGTTT CCGATCCCAA AGCCATCGGC AAGGTGGCGC GTCAAGCGCT GGAAATCCTC
CATTTCGACT CCAAGTCTGG CGAGTGGATA GACCACACGG ACCTGCAAGA TCAGGACTCC
GACTGCGAAG CGGGGTGTTA TCGCTGCTTG CTCAGCTATT TCAATCAGCC GGAACACATC
CTGATCGACC GTCGCAACCC CCTGGTGCTG GATCTCCTGT GCCGGTTGAT CCGCAGCCAG
GCTGAAAAGG GGCAATCCGG CCAGTCCGCC GATGACCTGC TCCAGTCGCT GCTCAATTCT
TCCGTATCCT CTCTGGAGAG GGCTTGGGTG CTCTATCTGC GTGATCATGG TTACAACCTG
CCGGACAGGG CCCAACCGTT GCTCTCCGAC TTCCATACCC AGGCGGATTT CGGCTACTCG
GGAAAACAGG TCCTCATCTA CATCGATGGT CCCCACCATG AAAGGGACTC TCAGCGCAAG
ATTGATGAAC AGATCACCCA GAACCTGCAG GATGCCGGCT TGACCGTTGT GCGCTTCCCC
AAGGAGCAAT CCACTTGGCC TGAAATCATC CAGGCGCACG GCTTCATTTT TGGACAAGGG
AAAAATTCAT GA
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| Protein sequence | MDVFEFRKRL VSEYEQFSRS FSKIKAEDMR DHVDAEYRNG RFWPAPLVQL NPSFVSGGWI
DGLVSEGLLH SECRSIFRVQ KGSGEMGFPM KVHKHQEEAI RIAQRGESYV LTTGTGSGKS
LSYFIPIVDH VLRHKEGKGK PGISAIVVYP MNALCNSQME ELDKFLRAGY GKDQEPVTFA
RYTGQESKEE RQRIAESPPD ILLTNYVMLE LIMTRHDPAD QAVIKHAAGL RFLVLDELHT
YRGRQGADVA MLVRRVRERL NADLLCVGTS ATMASEGTAA DRNRVVSDVA SRLFGSQVKP
ENIVTETLER ATTSDFTTGE LANAVQNGVP ATTTFEDLQK HPVAVWVELN LGLEHEDGKP
DGKLVRFSRP RTLRQAAEAL AGETGLPADQ CETYLARFLL LAFHTKDDNG KPLLAFRLHQ
FIAGAGNLFA TLEPVNRRYI TVNGQQFQPG ERDKLLFNTV FCRECGQEYF PIWATIENKH
PVSISPRELS ERANEDDDVQ FGFYMPDPDG LFDPSGVEDH FPEEWLDFER GDARLKPYYR
RYKPVSLKVN TKGESGAEGM PGWYIPGSFR FCLHPECGVS YDGSVRSDLT KLSSLSSEGR
SSATTMLTLS SLRYLLGEAE GLGAEARKLL GFSDNRQDAS LQAGHFNDFI QILLLRGALL
AAIQNEPDGV LRDDALTQRV VEHLRLEAGD FSSNPDAKGA KALNTEKTLR DVIGYRLYHD
LRRGWRITNP NLEQLRLLKI HYQSLQECAQ DQDEWSQCHP LLANATPELR ESLAQELLDT
MRRGLAIKTI YLDPNYLEQV RNRSFSDLKE PWGLSEDERP VTASVMLPRP KKQANRYDFP
TVHISYRSRF GSHLKSQATW GPGNPAFPKK FNEEIYNELI DGMLRVLEIY GLVEPVELSK
DDRGYRVGAS VLEWSINQSP EDAPAAKGFK ETDNAFFRTL YLNVAGQLQE KDRFLHQLEA
REHTAQVDSS TREERENAFR SAKLPVLFCS PTMELGVDIS SLNTVFMRNA PPTPANYAQR
SGRAGRSGQP ALVITYCAAR SPHDQYFFTD PTRMVAGSVN PPMIDLANEE LIKSHLHSVW
LAETGQKLGT SVKDVLNLEM PDSLPVRDDL ATFMDTPAVR ERAAKRAISI LAMVENELTE
EVAPWYGSEW QNNAIHASFQ QFNQAFERWR SLYRATTKQM EKSHAVQMNA AATEKDRKEA
KQRYDEARVQ QELLLDTRTT MNSDFYTYRF LASQGFLPGY NFPRLPLMAF IPGRREKVGR
DTFLSRPRFL GLSEFGPQSI IYHEGSTYRV RKAILGIKDE DSVSTSASLP VQIARLCPAC
GYGHFGDQKE FELCVNCAEP LEGGRNLVSL YRIEQVSTRR ATRITSDEEE RQRQGYETIT
TLRYAEENGL PRFTPLKVSE GSDDLLEIRY GPSSTLWRIN LGWRRRKEKS IYGFNIDVTS
GIWSKDEQAP EDVDDSVEQG KTVQRITPYA EDRRNILILQ PKEMLDEASM ATLQYAFKRG
IEAAFQLEES ELAAEPLPER GRRNAILFFE SAEGGAGVLT RLVSDPKAIG KVARQALEIL
HFDSKSGEWI DHTDLQDQDS DCEAGCYRCL LSYFNQPEHI LIDRRNPLVL DLLCRLIRSQ
AEKGQSGQSA DDLLQSLLNS SVSSLERAWV LYLRDHGYNL PDRAQPLLSD FHTQADFGYS
GKQVLIYIDG PHHERDSQRK IDEQITQNLQ DAGLTVVRFP KEQSTWPEII QAHGFIFGQG
KNS
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