Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1989 |
Symbol | |
ID | 4483209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 2466644 |
End bp | 2467513 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639722733 |
Product | integrase catalytic subunit |
Protein accession | YP_865897 |
Protein GI | 117925280 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.866629 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.746727 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGTACG CCTTTATTCA AGCTCATAGC AAAAGCTACT CTGTCGAGTC TTTATGCCGT GTTCTGGATG TTTCTCGTAG TGGATTTTAT GGCTGGCTTA ATCGAACCAG TACGAGTAAG GCTGAAGAGA ATCAACTGCT TGAAGAGTGG ATAGCAGAGA TTTTCAAGGT GAGTCGATCA ACCTATGGAA CACGGCGTAT ACGCAAAGCG TTAAATGAGC ATGGTGTACG AGTGAGTCGC CGACGCGTCT CCAGAATCAA GAGGAAGCTT GGCTTGGTTT GTAAAGCTCA GAAGCGTTAT AAGGTTGTAA CGACAGATTC AAATCACGCA CTGCCTATAG CGCCTAACCT TCTTGATCGT CAATTCGATA CGGAACGCCC TGATAACGCC TATGTTGGTG ACATCACATA TATTCCGACC AAGGAAGGTT GGCTTTATCT GGCTGTTTGG ATTGACCTTT ATTCCAGAGC TGTTGTCGGT TGGTCTATGG CAGACCATAT GAAAGCAGAA CTGGTAACAG ACGCTTTACG CATGGCCTTT TTCAAGCGCC GCCCAGAGGC CGGGCTGATT GTTCATAGTG ATCGTGGTAG CCAATATGCA TCTGAACTCT TGAGAAAATA TCTGGATGAA AGAGGCTATA CACAGAGTAT GAGTCGCCGT GGTAACTGTT GGGACAACGC ACCAGCAGAA AGCTTTTTCC ACACTCTCAA AGTTGAACTG GTTTCATCCT GTGACTTTAA GACACGCGAT GAGGCTAAAC AGATCATCTT TGAATATATA GAGGTCTTTT ATAACCGAAA GCGCAAGCAC TCATCCATCG GCTATATGAG TCCTTCTCAG TACGAAATAG AGTGGTTCAA GTCCGCGTAA
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Protein sequence | MRYAFIQAHS KSYSVESLCR VLDVSRSGFY GWLNRTSTSK AEENQLLEEW IAEIFKVSRS TYGTRRIRKA LNEHGVRVSR RRVSRIKRKL GLVCKAQKRY KVVTTDSNHA LPIAPNLLDR QFDTERPDNA YVGDITYIPT KEGWLYLAVW IDLYSRAVVG WSMADHMKAE LVTDALRMAF FKRRPEAGLI VHSDRGSQYA SELLRKYLDE RGYTQSMSRR GNCWDNAPAE SFFHTLKVEL VSSCDFKTRD EAKQIIFEYI EVFYNRKRKH SSIGYMSPSQ YEIEWFKSA
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