Gene Mmc1_1989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1989 
Symbol 
ID4483209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2466644 
End bp2467513 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content46% 
IMG OID639722733 
Productintegrase catalytic subunit 
Protein accessionYP_865897 
Protein GI117925280 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.866629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.746727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGTACG CCTTTATTCA AGCTCATAGC AAAAGCTACT CTGTCGAGTC TTTATGCCGT 
GTTCTGGATG TTTCTCGTAG TGGATTTTAT GGCTGGCTTA ATCGAACCAG TACGAGTAAG
GCTGAAGAGA ATCAACTGCT TGAAGAGTGG ATAGCAGAGA TTTTCAAGGT GAGTCGATCA
ACCTATGGAA CACGGCGTAT ACGCAAAGCG TTAAATGAGC ATGGTGTACG AGTGAGTCGC
CGACGCGTCT CCAGAATCAA GAGGAAGCTT GGCTTGGTTT GTAAAGCTCA GAAGCGTTAT
AAGGTTGTAA CGACAGATTC AAATCACGCA CTGCCTATAG CGCCTAACCT TCTTGATCGT
CAATTCGATA CGGAACGCCC TGATAACGCC TATGTTGGTG ACATCACATA TATTCCGACC
AAGGAAGGTT GGCTTTATCT GGCTGTTTGG ATTGACCTTT ATTCCAGAGC TGTTGTCGGT
TGGTCTATGG CAGACCATAT GAAAGCAGAA CTGGTAACAG ACGCTTTACG CATGGCCTTT
TTCAAGCGCC GCCCAGAGGC CGGGCTGATT GTTCATAGTG ATCGTGGTAG CCAATATGCA
TCTGAACTCT TGAGAAAATA TCTGGATGAA AGAGGCTATA CACAGAGTAT GAGTCGCCGT
GGTAACTGTT GGGACAACGC ACCAGCAGAA AGCTTTTTCC ACACTCTCAA AGTTGAACTG
GTTTCATCCT GTGACTTTAA GACACGCGAT GAGGCTAAAC AGATCATCTT TGAATATATA
GAGGTCTTTT ATAACCGAAA GCGCAAGCAC TCATCCATCG GCTATATGAG TCCTTCTCAG
TACGAAATAG AGTGGTTCAA GTCCGCGTAA
 
Protein sequence
MRYAFIQAHS KSYSVESLCR VLDVSRSGFY GWLNRTSTSK AEENQLLEEW IAEIFKVSRS 
TYGTRRIRKA LNEHGVRVSR RRVSRIKRKL GLVCKAQKRY KVVTTDSNHA LPIAPNLLDR
QFDTERPDNA YVGDITYIPT KEGWLYLAVW IDLYSRAVVG WSMADHMKAE LVTDALRMAF
FKRRPEAGLI VHSDRGSQYA SELLRKYLDE RGYTQSMSRR GNCWDNAPAE SFFHTLKVEL
VSSCDFKTRD EAKQIIFEYI EVFYNRKRKH SSIGYMSPSQ YEIEWFKSA