Gene Mmc1_1983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1983 
Symbol 
ID4481296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2461745 
End bp2462062 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content49% 
IMG OID639722727 
Productreverse transcriptase/retron type 
Protein accessionYP_865891 
Protein GI117925274 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.103738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.967018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCGA CAAAGGCTTT TGATATACCG AAAGAGTTAG TGTGGCAGGC CTATCTGGAT 
GTGAAACGAA GTTCAGGAGG GCCTGGCCTT GATGGTCTAA CGATGGAGGC ATTTGAAGAA
GATTTGAAGA ATCAGCTGTA TAGGTTATGG AACCGAATGT CGTCGGGCAG CTACTTTCCA
CCACCTGTCA TGCGGGTAGA AATCCCCAAA TCAGATGGTG GTGTGCGAGG GCTGGGTATT
CCGACGATTG GTGATCGTAT CGCGCAAGCG GTTGTGAAAC GATATCTGGA GCCATTGGTG
GAGCCAAAAA TTCCATGA
 
Protein sequence
MNATKAFDIP KELVWQAYLD VKRSSGGPGL DGLTMEAFEE DLKNQLYRLW NRMSSGSYFP 
PPVMRVEIPK SDGGVRGLGI PTIGDRIAQA VVKRYLEPLV EPKIP