Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1983 |
Symbol | |
ID | 4481296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2461745 |
End bp | 2462062 |
Gene Length | 318 bp |
Protein Length | 105 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639722727 |
Product | reverse transcriptase/retron type |
Protein accession | YP_865891 |
Protein GI | 117925274 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.103738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.967018 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCGA CAAAGGCTTT TGATATACCG AAAGAGTTAG TGTGGCAGGC CTATCTGGAT GTGAAACGAA GTTCAGGAGG GCCTGGCCTT GATGGTCTAA CGATGGAGGC ATTTGAAGAA GATTTGAAGA ATCAGCTGTA TAGGTTATGG AACCGAATGT CGTCGGGCAG CTACTTTCCA CCACCTGTCA TGCGGGTAGA AATCCCCAAA TCAGATGGTG GTGTGCGAGG GCTGGGTATT CCGACGATTG GTGATCGTAT CGCGCAAGCG GTTGTGAAAC GATATCTGGA GCCATTGGTG GAGCCAAAAA TTCCATGA
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Protein sequence | MNATKAFDIP KELVWQAYLD VKRSSGGPGL DGLTMEAFEE DLKNQLYRLW NRMSSGSYFP PPVMRVEIPK SDGGVRGLGI PTIGDRIAQA VVKRYLEPLV EPKIP
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