Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1979 |
Symbol | |
ID | 4481292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2455836 |
End bp | 2457089 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639722723 |
Product | RNA-directed DNA polymerase (Reverse transcriptase) |
Protein accession | YP_865887 |
Protein GI | 117925270 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.312745 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCGA CAAAGGCTTT TGATATACCG AAAGAGTTAG TGTGGCAGGC CTATCTGGAT GTGAAACGAA GTTCAGGAGG GCCTGGCCTT GATGGTCTAA CGATGGAGGC ATTTGAAGAA GATTTGAAGA ATCAGCTGTA TAGGTTATGG AACCGAATGT CGTCGGGCAG CTACTTTCCA CCACCTGTCA TGCGGGTAGA AATCCCCAAA TCAGATGGTG GTGTGCGAGG GCTGGGTATT CCGACGATTG GTGATCGTAT CGCGCAAGCG GTTGTGAAAC GATATCTGGA GCCATTGGTG GAGCCAAAAT TCCATGAAGA CTCCTATGGA TATCGTCCCA ATCGCTCAGC TTTGGATGCC GTTAGACAGG CCCGCCAGCG CTGTTGGCGG GATGACTGGG TGCTTGATCT GGATATCAGC AAGTTTTTCG ATAAACTGGA TCATGCATTG GTAATGCGTG CGGTGAAGCG GTTTACAGAT TGTAAGTGGG TTCTGCTCTA CATCGAGAGG TGGTTAAAAG CAGATGTTCA ACTACAGGAT GAGACCATCC TTCATCGGGA GATGGGAACC CCCCAGGGCG GTGTAATCAG CCCTCTGCTT GCAAACATTT TTCTGCATCT TGGTTTCGAT CAGTGGATGA AGGAGAATTA TCCTCACATT CATTTTGAGC GTTATGCCGA TGATATTGTC GTGCATTGCC GTTCCTTGAA GCAGTTGCAG TGGATCAAGA AGAGGATTGA ACAGCGCTTG AAGCTCTGCA AATTGTCTCT CAACGACAAA AAGACGCGAG TTGTCTATTG TAAAGATTCT CGTAGGTCAG GGGAGTGGAC GTGTCAGAGC TTTGATTTTC TGGGCTATAC CTTTCGTCCA AGGTCATCAC GCAACCACCG TGGAGAGCTT TTTGTAAGCT TTAGTCCGGC AATCAGTCGG AAAGCTTCGA AATCTCTACG GCAGACCATT CGGCGGGAGT GGAAGCTCCA AGCGAGGAGC CAGCACTCTA TTGAGGAACT GGCAAGACGT TTAAATCCAG TGATCACAGG TTGGATAAAC TATTATGGCC GATTCTGTCG ATCGGAGATG CACTCTGTAT TGGACCGGAT AAACACCGCT CTTGCCTTCT GGGCAATGCG TAAGTTCAAG AAACTCCGTG GGCACAAGAC CCGAGCGCAC AAGTGGCTCA AAGGGGTTGC CCAGAGAGAG CCATCTTTGT TTGCGCATTG GAAATATCAG GGCTGGATGA CAAGAGCCGT ATGA
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Protein sequence | MNATKAFDIP KELVWQAYLD VKRSSGGPGL DGLTMEAFEE DLKNQLYRLW NRMSSGSYFP PPVMRVEIPK SDGGVRGLGI PTIGDRIAQA VVKRYLEPLV EPKFHEDSYG YRPNRSALDA VRQARQRCWR DDWVLDLDIS KFFDKLDHAL VMRAVKRFTD CKWVLLYIER WLKADVQLQD ETILHREMGT PQGGVISPLL ANIFLHLGFD QWMKENYPHI HFERYADDIV VHCRSLKQLQ WIKKRIEQRL KLCKLSLNDK KTRVVYCKDS RRSGEWTCQS FDFLGYTFRP RSSRNHRGEL FVSFSPAISR KASKSLRQTI RREWKLQARS QHSIEELARR LNPVITGWIN YYGRFCRSEM HSVLDRINTA LAFWAMRKFK KLRGHKTRAH KWLKGVAQRE PSLFAHWKYQ GWMTRAV
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