| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1975 |
|---|
| Symbol | |
|---|
| ID | 4481288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 2453116 |
|---|
| End bp | 2453475 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639722721 |
|---|
| Product | IS66 Orf2 family protein |
|---|
| Protein accession | YP_865885 |
|---|
| Protein GI | 117925268 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3436] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00703448 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGCC CATCGCCGGA TATTTCTGTC GTCCATCTTT GTTTGGAGCC GGTGGATTTC
AGGAAGGGGA TCAACGGACT GGCTGCATTG GTGGAGGCAG AACTGGAGTT GAATCCCTTT
GATGAGGCTC TGTTCGTGTT TCGCAATCGA TCATTGGACA AGGTGAAAAT CCTTTACTGG
GAACGTAATG GCTTCTGCCT GTGGCAAAAG CGGCTGGAAA AGGACCGATT TCACTGGTTG
CGCCAGGGAG GTGCCGCAGA AATCCAAATC ACGGGGCGGC AGCTGAATTG GCTACTTGAT
GGCTACAACC TGGCGGCAAT GAAGGGTCAC AATAAACTGC ATTTTTCTTC GATTGTATAG
|
|---|
| Protein sequence | MMRPSPDISV VHLCLEPVDF RKGINGLAAL VEAELELNPF DEALFVFRNR SLDKVKILYW
ERNGFCLWQK RLEKDRFHWL RQGGAAEIQI TGRQLNWLLD GYNLAAMKGH NKLHFSSIV
|
|---|
| |