| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1970 |
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| Symbol | |
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| ID | 4481283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2448313 |
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| End bp | 2450508 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639722718 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_865882 |
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| Protein GI | 117925265 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.231744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.591198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGCAT CTGCTGACAA CGCTGTGCTG GATATTTTAT CTCAGAAGCC CGATTCCGGG
CTGCTCTGTG TGATGCTGCT TGCGCGTTTT CACCAGATTC CCAGCTCACG GGATGGGCTG
CGCCATGAAC ATGGTCAGCC AGGGGAGAGC TTTGGACATT TGGAGGTACT CAAGGCGCTC
AAGGCGTTGG GGCTGAAGGC CAAGGCGGTA AAAAGCGCCA AGAAGCGTCT AAATAAACTA
CCGCTGCCCG CCATCATTCC TTCCGCTAAG GAGGGGGGCT TTCAAATTCT GGCTAAGGCC
GAAGGGGGCA AGGTTCTGCT GCACGATCCC ACCGAGGCCA AGCCGGAGGT GATGGATACA
GAAGTGTTTT TGGAACAGTG GGATGGCTCG GTCATTCTAG CCGCCACACG GGGTAAAGAT
CCCACCGGTG GTAAGTTTGA TATCACCTGG TTTATTCCCG CCGTTATCCG CTACCGTAAG
CTCTTCTCCG AGGTGCTCTA CGCCTCCTTT TTTCTGCAAG TTTTCGCCCT GATCTCGCCG
CTCTTCTTCC AGGTCATCAT CGACAAAGTG TTGGTGCACC GCGGCCTCAC CACCCTGGAT
GTGCTGGCTC TAGGCATGCT GGTGGTGGCG CTGTTTGAGA TGTTTCTGGG GGGCCTGCGT
ACCTACCTAC TCAGTCACAC CACCAATCGT ATCGATGTGG AGTTGGGGGC TAAGCTCTAT
CGCCACCTGA TGAATCTGCC CATGTCCTTC TTTGGCTCCA GACGGGTGGG GGACTCGGTG
GCGCGGGTGC GAGAGCTGGA GAACATTCGT AATTTTATCA CCGGCTCAGC TATGACGGTG
GCCATCGATA TTCCCTTCAC CTTTGTCTTT GTGGCGGTCA TGTTTTGGTA TAGCCCCACC
CTGACCTACG TGGTGGTGGG GGCGATCCCT TTCTATATTT TGCTGTCGGT CTTTGTCTCC
CCCATCCTTA GGAAACGGGT GGAGGAAAAA TTCGCCCGTG GTGCTGAAAA CCAATCCTTT
TTGGTGGAGT CGGTCACCGG CGTACAGACG GTTAAAGCTT CCGCACTTGA GCCGCAGATG
GGGCGCCGCT GGGATGAACA GCTGGCGGCC TATGTTCACA CCTCCTTCCG TGTCACCAAT
CTGGGCAACT GGGCCAGTCA GATTGCAGGG TTGATTAATA AAATCACCAC CCTGTTGATT
CTCTGGTTTG GGGCACATCT GGTTATTGAC GGCTCGTTGA CCGTGGGTCA GCTGGTAGCC
ATCAACATGC TCTCCGGCCG GGTCAGTGGG CCGATCCTGC GGCTGGTGCA GCTGTGGCAG
GACTATCAAC AGGCCGGGGT CTCCATTCGC CGGCTGGGGG ATATCCTCAA CACCCCCTCC
GAAGCAACCT CCGACCCCAG CCGTGCGGCA CTGCCCAATC TAAAAGGGCG GGTGACCCTG
GAGCGCATCA ACTTCCGCTA TGACCCAGAG TCCCCCGAAG TGATTCGGGA ACTCTCCTTG
GATATCCGCC CCGGGGAGGT GATCGGCATC GTTGGGCCGT CGGGTTCCGG TAAAAGCACG
GTGACCAAGC TGGTACAGCG CCTCTACACC CCAGAGCGGG GCCGGGTTTT GGTAGATGGG
GTGGATTTAG GGCAGGTGGA TCCCGCTTGG CTGCGTCGTC AGGTGGGGGT TGTGCTGCAG
GAGAACTTTC TGTTTAAGCG CTCGGTGCGG GAGAACATCG CCATTGGCGA TCCCGGTATT
CCCATGGAGC GGGTTATTGC GGCGGCCAAG CTGGCCGGGG CGGAGGAGTT TATCTCCGAG
CTTAAGCAGG GCTATGAGAC GGAACTGGAT GAACATGGTG GCAACCTCTC CGGTGGTCAG
CGGCAGCGCA TCGCCATCGC ACGGGCGTTG GTCAGTGATC CACGCATTTT GATCTTTGAT
GAGGCCACCA GCGCCCTGGA TTACGAGTCG GAGAAGATCA TTCAGGAGAA CATGCGCTCC
ATCTGTCAGG GGCGTACCGT GATTATCATT GCCCACCGTC TGAGTGCGGT GCGGGGTTGT
AACCGCATCA TGGTGATGGA TAAAGGGGTC ATCATGGAAG AGGGCGGTTA TGCAGAGCTG
CTACAGAAAA AAGGGTGGTT TGCACGTATG CACTACCATC AGTCGGGCAT GGGTGCGGTG
GCGCAAGCCA TCAACACCGG CAAGAAGGAG GCCTGA
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| Protein sequence | MTASADNAVL DILSQKPDSG LLCVMLLARF HQIPSSRDGL RHEHGQPGES FGHLEVLKAL
KALGLKAKAV KSAKKRLNKL PLPAIIPSAK EGGFQILAKA EGGKVLLHDP TEAKPEVMDT
EVFLEQWDGS VILAATRGKD PTGGKFDITW FIPAVIRYRK LFSEVLYASF FLQVFALISP
LFFQVIIDKV LVHRGLTTLD VLALGMLVVA LFEMFLGGLR TYLLSHTTNR IDVELGAKLY
RHLMNLPMSF FGSRRVGDSV ARVRELENIR NFITGSAMTV AIDIPFTFVF VAVMFWYSPT
LTYVVVGAIP FYILLSVFVS PILRKRVEEK FARGAENQSF LVESVTGVQT VKASALEPQM
GRRWDEQLAA YVHTSFRVTN LGNWASQIAG LINKITTLLI LWFGAHLVID GSLTVGQLVA
INMLSGRVSG PILRLVQLWQ DYQQAGVSIR RLGDILNTPS EATSDPSRAA LPNLKGRVTL
ERINFRYDPE SPEVIRELSL DIRPGEVIGI VGPSGSGKST VTKLVQRLYT PERGRVLVDG
VDLGQVDPAW LRRQVGVVLQ ENFLFKRSVR ENIAIGDPGI PMERVIAAAK LAGAEEFISE
LKQGYETELD EHGGNLSGGQ RQRIAIARAL VSDPRILIFD EATSALDYES EKIIQENMRS
ICQGRTVIII AHRLSAVRGC NRIMVMDKGV IMEEGGYAEL LQKKGWFARM HYHQSGMGAV
AQAINTGKKE A
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