| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1929 |
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| Symbol | |
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| ID | 4483255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 2401983 |
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| End bp | 2404358 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639722676 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_865843 |
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| Protein GI | 117925226 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.108732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.835393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTTG GACTTTCAAC GCGCTTTATT TTCTTTATCA GCGTGCTGCT GACGGTTGCT
TTTGTCGCCA GCGGGGTGTT GATTATGCAG TTGGAAAAGC GCTTCATGGC GAGTCAATTT
TCCCAGCGTG CCGATGCCTT GGGCAACTTT GTCGCAAAAA TCGCCCCTGA ATCCATTCTC
TCTTTCGATG TTGTGCAATT AGAGCATTTT GCCGAAATGC TCATGGGTCA ACCCGATCTT
ATTTTAGCCG CCATCGTTGA CCGCAGTGGC GCACCATTGG CTATTCACCT GAATGAAAGC
CTCCCCCGTC CACTACACTT TAAATTTCGC GGTTCCTTAT TTGAAAGCGC CACCTTTAAG
AACCTCATTG CATTCTACAA AAACCACCCG CAAGCGATCT ATTTTTCCTA TCCTATCCGC
CACCAATACA ACCTGCTCGG TGAGGTGTTA ATCATTTTGG ATAGCTCCTC GCAAAGAGAG
GTGCAGCACA AAATTTTTCT ACAACGGATT ATCGTCGCCA TTGGTGTCAT TTTATTGGTG
GTTCTCTCCC TCTATCTAGG GTTTAAACGC TATATCTTAA GCCCCATTTT GGATCTGGTC
GAAGGGGCCA ATCGCATGGC CCATGGCAAT TATAAAGAAC CCATTCCCCG TACCACCAAA
GCAGAGTTGG ATACGCTCAC CGTCGCTGTT AACCATATGA TGCTCAGTAT TCGCACCAAC
ACCGAAGAGT ATGCCAAAAT TTTTCGTGCG GTCGAACAGA GCCCAGCCTC GGTGGTGATT
ACCGATGCTC AAGGCAATAT CGAGTATGTT AACCCAAAAT TTTGTCAGCT CACCGGCTAC
AGCGCCCAAG AAGTGTTGGG GAAAAATCCC CGCCTGTTAA AAAGTGGCGA GATGAGCCCT
AATTTTTATC GGGATTTGTG GCATACCGTC ACCACAGGTT TGGAGTGGCA TGGTGAATTT
TATAACCGCG CGCAAAATGG CTCGCTGTTC TGGGAGGCCG CCTCGATTTC TGCCATCCGT
TCTGAGCAAG GCAAAATTAC CCACTTCGTC GCGGTAAAAG ATGATATCAC CGCCCGTAAA
AAACTGGAAC GTGAGCTCCA ACAAGCCCGG GATCGGGCAG AGAGCTCTAA CCGCGCAAAA
AGTGAATTCC TGGCACTCAT GAGCCACGAA ATTCGCACCC CCATGAATGC CATTTTGGGT
ATGTCAGAAC TACTGGCCGA GAGCAATTTA AGTGGCGAAC AGCGCGAGTT GTTAACCGTA
CAACGCCGTG CTGCATTGGC CTTGCTGGAT CTAATCAACG ACATTTTAGA CCTTTCACGG
GTAGAGTCAG GCCGTTTGGA GTTGGATCAT GCCCCCATGC ATTTACCTGA TTTTTTTATT
GAGATACAGG ACCTGTTTCG CCAGCAGGCG ATCAAAAAAA ATCTGGCCTT CTCCATCACC
CTAGAAGATG ACTTACCTAA AACCTATTTT GCAGACCGAG CGCGTTTACG ACAGGTCATG
ATCAATCTGG TTGGCAACGC CATTAAATTT ACCCAACAAG GTGGTGTTTG GATAAGTGTT
GAGCGACTGA GTCAACAGGG AGAGATGGTC AAGCTAAAAT TTTCTGTGGT CGATAGTGGA
TGCGGCATCC CCAGCGAGGC CCAATCTCAA ATTTTTGAGC CCTTTACCCA AGCCGATGCC
TACGTTACCC GCCACCATGG GGGGACAGGT CTTGGGCTGA CCATCAGTCA ACGTTTAGTG
CAGCTGTTTG GGGGCACCTT GCAGGTGGAG AGCACCCCAA ACCAAGGCAG TCGTTTTTCC
TTTATCCTTA TATTGCAGGT GACCACCGAA GAGCGCTCAA CACAACCCAA TACACAGGCG
CAAACCACCC CCGAGCCTAA CACCGCACCA TCCAGCGGAG CTCCGAATGC TCGTATCTTG
CTGGCGGAGG ATATGCCAGA TAATGCACTA TTAATTAAAC GCTTTTTAAA AAATTACCCC
TGTGAATTAA CCCTTGTTAC CGATGGCAGA CAGGCGGTGG AGCAATTTTG CCGCACCACA
GCCCATTTTG ACTTGGTATT GATGGATATG CAGATGCCGG TCTTGGATGG TTATAGCGCG
GTTAGGGAGA TCCGCGAGTA TGAAGCGATC CATGATCTAG CCCCCACCCC TATCTTGGCA
CTGACCGCCC ACGCGCTTAA AAATGATGCC GAAAAGAGCC TCGCCGCTGG GTGTGATGAA
CACCTTACCA AACCCATTCG TAAAGAGGTA CTCTTGGCCG CCATTAGCCG TCACCTCTCC
TTAGCCAAAC ACGACAAGCC TCAACAGCAT GTTATAAATG ATATTTTACC AGCCCCCTCA
CGTATGCCGC AAGAGCCTGA CCCCAGTGCT TTATAA
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| Protein sequence | MRFGLSTRFI FFISVLLTVA FVASGVLIMQ LEKRFMASQF SQRADALGNF VAKIAPESIL
SFDVVQLEHF AEMLMGQPDL ILAAIVDRSG APLAIHLNES LPRPLHFKFR GSLFESATFK
NLIAFYKNHP QAIYFSYPIR HQYNLLGEVL IILDSSSQRE VQHKIFLQRI IVAIGVILLV
VLSLYLGFKR YILSPILDLV EGANRMAHGN YKEPIPRTTK AELDTLTVAV NHMMLSIRTN
TEEYAKIFRA VEQSPASVVI TDAQGNIEYV NPKFCQLTGY SAQEVLGKNP RLLKSGEMSP
NFYRDLWHTV TTGLEWHGEF YNRAQNGSLF WEAASISAIR SEQGKITHFV AVKDDITARK
KLERELQQAR DRAESSNRAK SEFLALMSHE IRTPMNAILG MSELLAESNL SGEQRELLTV
QRRAALALLD LINDILDLSR VESGRLELDH APMHLPDFFI EIQDLFRQQA IKKNLAFSIT
LEDDLPKTYF ADRARLRQVM INLVGNAIKF TQQGGVWISV ERLSQQGEMV KLKFSVVDSG
CGIPSEAQSQ IFEPFTQADA YVTRHHGGTG LGLTISQRLV QLFGGTLQVE STPNQGSRFS
FILILQVTTE ERSTQPNTQA QTTPEPNTAP SSGAPNARIL LAEDMPDNAL LIKRFLKNYP
CELTLVTDGR QAVEQFCRTT AHFDLVLMDM QMPVLDGYSA VREIREYEAI HDLAPTPILA
LTAHALKNDA EKSLAAGCDE HLTKPIRKEV LLAAISRHLS LAKHDKPQQH VINDILPAPS
RMPQEPDPSA L
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