Gene Mmc1_1923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1923 
Symbol 
ID4483249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2397189 
End bp2398295 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content57% 
IMG OID639722670 
Productglycosyl transferase, group 1 
Protein accessionYP_865837 
Protein GI117925220 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.80295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACGG CACCACGACC CCTGCATATT GTCCATACCG AAGCCTCCAT GGGTTGGGGA 
GGACAGGAAA TTCGCATCCT AACGGAATCC AAGGGGTTAA TGGAGCGTGG GCATCGGGTT
TCTGTTCTCT GTGCCGAGGG TTCTTTGCTT CAGCAACAGG CGGCAGATTA TGGAGTGGTG
GTGACACCGC TACCCATAGG GCGCAAGGGG TGGCGGGGGC TTCGCGCCAT TTCCCGTTGG
TTGCGTGAGC ATGAGCCGGA TGTGATTGTC ACCCACAGCT CTACGGATAG TTGGTTAACG
GCTTTGGCGG CGCGTTTGCG GTCGCGGCCC ATTCCGGTTA TCCGGTTGCG GCATATCTCG
GCCCCAGTGA CAAAAAATCT CCCCACCAAG TGGCTGTATG GCACCCTAAG CCAGCATGTT
ATTACCACCG GCGAGCTCAT CTGTGACATG TTGGTGGAGT ATAATGGGCT GCCCAGGGAG
CATGTGACCG CCATACCGAC AGGCATTGAC TTGGAACAGT TTCAACCAGG CGAGCAAAGG
CAGGCACGGG CCGCTGTGGG CTTGCCAGAG GATCTGTTTA TTATTGGCAT TGTCGCGACC
TTGCGCAGTT GGAAGGGGCA TCTCTATCTT TTTGATGCTT TTTCTAAAAT GGCCACCCCC
AACATGCGCC TGTTGGTGGT GGGGGATGGG CCAGAAGGGC CGGATTATCG GAAACATGTG
CATCAATTAG GCATACAGGA GCAGGTCTTG ATGGTCGGGC AGCAGCGGGA TGTGGTGCCT
TGGCTGCGTG CGATGGATCT GTTTTGTCTG CCCTCCTATG CCAATGAAGG GGTGCCCCAG
GCGTTGATGC AGGCCATGGC TTGTGGTTTG CCCTGCGTCA CGACCACCGC AGGCAGCATG
GGCGAAATCG TCTACCATGG TCGCAATGGG CTGTTGGTGC CACCCAAGCG CAGCGATCTG
CTGGCGCAAG TGCTGCTCAA TTTGGCGGAG GATCCGGTTC AGCGGGATCT GCTTGCCACC
CAGGCGGCGC AGGATGCCAA ACGGCAGTTC GGGCTGAGCC ATATGTTGGC GCGTATGGAA
CAGCAATTCT ACGCTGTTTT ACCATAA
 
Protein sequence
MVTAPRPLHI VHTEASMGWG GQEIRILTES KGLMERGHRV SVLCAEGSLL QQQAADYGVV 
VTPLPIGRKG WRGLRAISRW LREHEPDVIV THSSTDSWLT ALAARLRSRP IPVIRLRHIS
APVTKNLPTK WLYGTLSQHV ITTGELICDM LVEYNGLPRE HVTAIPTGID LEQFQPGEQR
QARAAVGLPE DLFIIGIVAT LRSWKGHLYL FDAFSKMATP NMRLLVVGDG PEGPDYRKHV
HQLGIQEQVL MVGQQRDVVP WLRAMDLFCL PSYANEGVPQ ALMQAMACGL PCVTTTAGSM
GEIVYHGRNG LLVPPKRSDL LAQVLLNLAE DPVQRDLLAT QAAQDAKRQF GLSHMLARME
QQFYAVLP