Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1923 |
Symbol | |
ID | 4483249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2397189 |
End bp | 2398295 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639722670 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_865837 |
Protein GI | 117925220 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.80295 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGACGG CACCACGACC CCTGCATATT GTCCATACCG AAGCCTCCAT GGGTTGGGGA GGACAGGAAA TTCGCATCCT AACGGAATCC AAGGGGTTAA TGGAGCGTGG GCATCGGGTT TCTGTTCTCT GTGCCGAGGG TTCTTTGCTT CAGCAACAGG CGGCAGATTA TGGAGTGGTG GTGACACCGC TACCCATAGG GCGCAAGGGG TGGCGGGGGC TTCGCGCCAT TTCCCGTTGG TTGCGTGAGC ATGAGCCGGA TGTGATTGTC ACCCACAGCT CTACGGATAG TTGGTTAACG GCTTTGGCGG CGCGTTTGCG GTCGCGGCCC ATTCCGGTTA TCCGGTTGCG GCATATCTCG GCCCCAGTGA CAAAAAATCT CCCCACCAAG TGGCTGTATG GCACCCTAAG CCAGCATGTT ATTACCACCG GCGAGCTCAT CTGTGACATG TTGGTGGAGT ATAATGGGCT GCCCAGGGAG CATGTGACCG CCATACCGAC AGGCATTGAC TTGGAACAGT TTCAACCAGG CGAGCAAAGG CAGGCACGGG CCGCTGTGGG CTTGCCAGAG GATCTGTTTA TTATTGGCAT TGTCGCGACC TTGCGCAGTT GGAAGGGGCA TCTCTATCTT TTTGATGCTT TTTCTAAAAT GGCCACCCCC AACATGCGCC TGTTGGTGGT GGGGGATGGG CCAGAAGGGC CGGATTATCG GAAACATGTG CATCAATTAG GCATACAGGA GCAGGTCTTG ATGGTCGGGC AGCAGCGGGA TGTGGTGCCT TGGCTGCGTG CGATGGATCT GTTTTGTCTG CCCTCCTATG CCAATGAAGG GGTGCCCCAG GCGTTGATGC AGGCCATGGC TTGTGGTTTG CCCTGCGTCA CGACCACCGC AGGCAGCATG GGCGAAATCG TCTACCATGG TCGCAATGGG CTGTTGGTGC CACCCAAGCG CAGCGATCTG CTGGCGCAAG TGCTGCTCAA TTTGGCGGAG GATCCGGTTC AGCGGGATCT GCTTGCCACC CAGGCGGCGC AGGATGCCAA ACGGCAGTTC GGGCTGAGCC ATATGTTGGC GCGTATGGAA CAGCAATTCT ACGCTGTTTT ACCATAA
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Protein sequence | MVTAPRPLHI VHTEASMGWG GQEIRILTES KGLMERGHRV SVLCAEGSLL QQQAADYGVV VTPLPIGRKG WRGLRAISRW LREHEPDVIV THSSTDSWLT ALAARLRSRP IPVIRLRHIS APVTKNLPTK WLYGTLSQHV ITTGELICDM LVEYNGLPRE HVTAIPTGID LEQFQPGEQR QARAAVGLPE DLFIIGIVAT LRSWKGHLYL FDAFSKMATP NMRLLVVGDG PEGPDYRKHV HQLGIQEQVL MVGQQRDVVP WLRAMDLFCL PSYANEGVPQ ALMQAMACGL PCVTTTAGSM GEIVYHGRNG LLVPPKRSDL LAQVLLNLAE DPVQRDLLAT QAAQDAKRQF GLSHMLARME QQFYAVLP
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