| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1915 |
|---|
| Symbol | |
|---|
| ID | 4481139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 2379688 |
|---|
| End bp | 2380953 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639722662 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_865829 |
|---|
| Protein GI | 117925212 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00232567 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.102109 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTCT ACGTTCGCAA CGCTAAACAC CCGGATCTCG GGTTGGTAAA CCTCATCATC
CAAAAGGGTA TCATTACCGA AATGCGTGGC AATCTCTCCC AGCCTAAAGA GATTCGTACC
ACACTGGATG CCACCGGCCA GCTTATTCTA CCGGGCCTCG TTAATGCGCA CACCCACGCC
GCCATGACAC TCTTTCGCGG CTATGGCGAT GATATGCCCC TCATGGCTTG GCTAGAGCAG
CGTATTTGGC CCGCCGAAGC CAAGCTGACT GAAGAAGATG TCTACTGGGG AACCAAACTG
GCCTGCTATG AGATGATCCG CTCTGGCACC CTGCATTTTC AAGATATGTA CTGGCACTTT
CACGGGGTGG CGCAGGCCGT AGAAGATAGC GGTATACGCG CAGGGGTTGG TGCGATCTTT
ATTGATGTCG CCGGTGCCGA GCAGGCCACA CAATTTAAAC AGCAGGCGCA AACCCTGCTG
GAAGAGCGCA ACCGCTACTC GGACCGCGTG GAGTATGTGC TTACCCCCCA CGCCATTTAT
ACCGTCAGCC CCGCAACCCT GCGCTGGATC GCCAATTTCT CAGAACAGCA TCAGTTGCCC
GTTCACATTC ATCTCTCCGA AACCCAACAT GAGGTAGAGA GCTGCCTACA GCAACATGGC
GTGCGTCCAG CACAACACCT GCATAACCAG GGCCTGCTTA CCCCACGCAC CTTTTTAGCC
CATTGTGTGC ACTTGGATGA TACCGAATGG GATCTCATCG CCCAAAGTGG GGCCACCGTC
GTCACCAATC CTGTCTCAAA TATGAAGCTC GCAGTGGGTG GGGTGTTCCC TCTGCATAAA
GTACTGGCCC GTAACATTCC CGTTGCACTG GGCACCGATG GCACCGCATC CAATAACAGT
TTGGATCTTT TCCAAGAGAT GAAAGTCTTA GCCCTTATCC AGAAGCACCA GCAGATGGAT
CCGACCGCAG CCCCTGCCCA ACAGGTGTGG GAGATTGCCA GTGGCAAACA GACCCCCCTC
TATGGGCAAC ATGGACGGCT AGAGATTGGC AGCCGGGCCG ATTTTATTCT GCTCGATCTT
GGGGATACTG AAACCACCCC CCACCACTGC CTTACCTCCA ACCTCGTCTA CGCGGCCACG
GGGCATCAGG TACGTAGTGC TGTGGTCGCA GGTCGGGTGG TGATGTATGA ACGTGTGATC
GAGGGCGAGG CCGAAGCGAA AAAACAGGTC GAGGCCCGCG CCCATAGGCT CTGTCGCAAC
GGTTAA
|
|---|
| Protein sequence | MDLYVRNAKH PDLGLVNLII QKGIITEMRG NLSQPKEIRT TLDATGQLIL PGLVNAHTHA
AMTLFRGYGD DMPLMAWLEQ RIWPAEAKLT EEDVYWGTKL ACYEMIRSGT LHFQDMYWHF
HGVAQAVEDS GIRAGVGAIF IDVAGAEQAT QFKQQAQTLL EERNRYSDRV EYVLTPHAIY
TVSPATLRWI ANFSEQHQLP VHIHLSETQH EVESCLQQHG VRPAQHLHNQ GLLTPRTFLA
HCVHLDDTEW DLIAQSGATV VTNPVSNMKL AVGGVFPLHK VLARNIPVAL GTDGTASNNS
LDLFQEMKVL ALIQKHQQMD PTAAPAQQVW EIASGKQTPL YGQHGRLEIG SRADFILLDL
GDTETTPHHC LTSNLVYAAT GHQVRSAVVA GRVVMYERVI EGEAEAKKQV EARAHRLCRN
G
|
|---|
| |