| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1911 |
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| Symbol | |
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| ID | 4481133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2375408 |
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| End bp | 2375620 |
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| Gene Length | 213 bp |
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| Protein Length | 70 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639722656 |
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| Product | cold-shock DNA-binding protein family protein |
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| Protein accession | YP_865825 |
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| Protein GI | 117925208 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000206161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.143594 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTCAAC GCGAAACCGG AACTGTGAAG TGGTTTAACG ACGATAAAGG CTTTGGCTTT
GTTGCCCGTG ACAATGACAA AGGCGATGTT TTCGTACACC ACTCGGCCAT CAGCGGCACA
GGTTTCAAGT CACTCAAAGA GGGTCAACGT GTGGAGTTTG CCGTAGTCGA TGGCCGTAAA
GGCCCCGCCT GCGAAGATGT GGTTGCCATT TAA
|
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| Protein sequence | MSQRETGTVK WFNDDKGFGF VARDNDKGDV FVHHSAISGT GFKSLKEGQR VEFAVVDGRK
GPACEDVVAI
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