| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1908 |
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| Symbol | |
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| ID | 4481130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2373339 |
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| End bp | 2373830 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639722653 |
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| Product | thiosulfate-binding protein SoxY |
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| Protein accession | YP_865822 |
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| Protein GI | 117925205 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5501] Predicted secreted protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00695588 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0814173 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATA TGCAAATGAT TGAAATGACC CGCCGTGCGC TGTTTACCGG TGCCGGTCGT
GCAGGTGTCG CAGCTGCCCT GTTGGGGGGT AGTGTGGTGG TTCCTCAGAG TGCCATGGCT
GCTGACCTTG ATAAAGTTAA AGCTAACATT AAAGAGCACA TGGGCAGCGG TGACTACCAA
GAGAGTGATA CCGTTAAGAT TGATGCCCCA ATTATTGCGG AAAATGGTGC TATGGTGCCG
GTTAAAATTA CCGTTGATCA CCCCATGGAT ACCGACAACT ATATCCAATC CATAGGGGTG
TTTGTCGACA ATAATCCCAC CCCCTTTGCA GGGGTCTATG CCATGGGTCC TGCCAACGGT
AAAGCGTATG TTTCTGCCCG TCTAAAGATC GGTAAGACCT CACAGGTTCG TGCCGTAGCC
ATGACCAATA CCGGTAAGCT CATCGGTACC TCGAAAGAGG TGAAGGTGAC CATTGGTGGT
TGTGGCGGCT GA
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| Protein sequence | MADMQMIEMT RRALFTGAGR AGVAAALLGG SVVVPQSAMA ADLDKVKANI KEHMGSGDYQ
ESDTVKIDAP IIAENGAMVP VKITVDHPMD TDNYIQSIGV FVDNNPTPFA GVYAMGPANG
KAYVSARLKI GKTSQVRAVA MTNTGKLIGT SKEVKVTIGG CGG
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