| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1894 |
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| Symbol | |
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| ID | 4483593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 2352687 |
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| End bp | 2353883 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639722639 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_865808 |
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| Protein GI | 117925191 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.229485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCT TAAAAGCTCT ACGCACTCTA CTGTTCCCCC TGCTTATTTT AGCCGGTGGT
GCATGGGGCA TTCGTTTGAT CGGCAGCATG GACCGCCTGC CTCCGACCCC CAGCTCGCTG
CAAGCCCAGC CTGTGGTTAC GGTGCAGCGT GTGGAGCCAA GCTGGCAAGC CCCCCAGATC
ATCTTGCATG GCGAGGTGCG CAGCGACCGC CAGCTGCGTC TCATGACTCG CATTCAGGGG
CGAGTGGCCT ACATAAGCCC CGCTTTAAAG CTGGGCGGAG CGGTTAAACA AGGGGCCTTG
TTGCTCTCTT TGGAAGATCG GGAGGCACGG CTGCATCTAC AAGCCCAACA GGCCCGCACC
CGTACCGCTG AGCTGGAGTT AGAGATTGAA GCCGGTCGGC AAAAGATCGC CAAACAGGAT
TGGGCGGTAT TACGTCTGGG GGAGGTTGAG CAAGCCTCTG ACCTAGCCTT GCGACTGCCC
CATTTGGGTG TGGTGCGGCA AAAATTAGAG ATGGCCCGTA TCGAGTTGGC CCAAGCCCAA
CAAGAGTTGA GCTACACCAA ACTTTATGCC CCCTTTGATG CCTTGGTCGT CAGCAAGGAT
GTCGCCATGG GCCAATGGCT TAAAGCAGGA GAGGAGATCG CGCGCCTGCT GGATAGCCAG
CGTTTTTTGG TACATCTGCC CATTTCATCC AGCCAGTTTG CTCTGCTGGA TCAAAATAAG
CTCAAGCTGG GAGAGGGTCC CAAGCTGTTT TTGCGCCCCG CCCACGACTT ACAAGCCCCG
CCAAGCGTGG CCCAATTAAC CGGTTTTGTT GGCGAGTTGC TCGCACCAAC TCGGCGCTTG
GTGCTGCTTG CCCAATTGGA CAATCCCATG CAAAACCGCG GCACCTTATT GCTGCCCGGC
AGCTTTGTGC AAGCGCAATT TACCGGACAA CTGCAACCTC ATATCTATGC CATACCGCCC
CAGGCTCGCC ATAATGGTGA CCGCATTTGG ACCGTAGAAA CGTTGCAAAA TCCCACACTG
CGTAGTTATG GGATACATCC CCTATGGCAA CAGGGAGAGG TTTGGTATAC CACCTTAACC
GAGGCCGGAC AAAAGCCCTT GCTGCTGGTC ACCAGCCCCC TCTCCCTACC GGTTGAAGGG
CAATCTGTCA GCGTGACGCA ATCCACAGCG TTGTCTACCC AAGGGCAACA ACCATGA
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| Protein sequence | MNRLKALRTL LFPLLILAGG AWGIRLIGSM DRLPPTPSSL QAQPVVTVQR VEPSWQAPQI
ILHGEVRSDR QLRLMTRIQG RVAYISPALK LGGAVKQGAL LLSLEDREAR LHLQAQQART
RTAELELEIE AGRQKIAKQD WAVLRLGEVE QASDLALRLP HLGVVRQKLE MARIELAQAQ
QELSYTKLYA PFDALVVSKD VAMGQWLKAG EEIARLLDSQ RFLVHLPISS SQFALLDQNK
LKLGEGPKLF LRPAHDLQAP PSVAQLTGFV GELLAPTRRL VLLAQLDNPM QNRGTLLLPG
SFVQAQFTGQ LQPHIYAIPP QARHNGDRIW TVETLQNPTL RSYGIHPLWQ QGEVWYTTLT
EAGQKPLLLV TSPLSLPVEG QSVSVTQSTA LSTQGQQP
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