Gene Mmc1_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1890 
Symbol 
ID4483589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2348815 
End bp2349450 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content54% 
IMG OID639722635 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_865804 
Protein GI117925187 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3751] Predicted proline hydroxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.227859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.306008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTCG CAGAAGAAAC CTTGCTCGAA CAAAACTTGT TTCATGAAAT TATAGAATCC 
ATGGTTCAGC ATCGCCCTTA TGTATGCCAT CAACAGGGTA ATTTGCCCAT GTTGCTGGCG
TTGCATCAAG AGGTTACGGC CCAGCATCAA GGGGGCCATC TGCGCCGGGC CGGGGTAGGA
CGAGCCGACG GACACCACAT AAACGATGCC CTACGTACCG ACCTAATCCT TTGGTTGGAC
GGCACCACCG CCGCACAACT GGCTTACATG GCATGGCTAG AGCGTCTACG GCTGACGTTA
AATGCCGCCC TGCAATTGGG GCTTTTTTAT GTAGAGTCCC AATTTAGCTG TTATCAACCA
GGAGGTTACT ACCGCCGTCA CAAAGATGCC TTTGTGGGGG AGGAAAACCG CATTGTTACC
GTTGTGACCT ATCTTAACCC TCAGTGGCAG GCGCATCATG GCGGGGCGCT GTTGATTCAC
CCTAGTGGGC ATGGTCTTAC ACTCACCGTG CAACCCAAAC TCGGCACCAT GGTCTGTTTT
CTTAGTGAGG CGTGGCCTCA TGAGGTCAGC CCCACCCAGT GTGACCGCTA CGCCATTGCC
AGTTGGTTTC GCCGGAACCC AGGACCGCTG TTATGA
 
Protein sequence
MDVAEETLLE QNLFHEIIES MVQHRPYVCH QQGNLPMLLA LHQEVTAQHQ GGHLRRAGVG 
RADGHHINDA LRTDLILWLD GTTAAQLAYM AWLERLRLTL NAALQLGLFY VESQFSCYQP
GGYYRRHKDA FVGEENRIVT VVTYLNPQWQ AHHGGALLIH PSGHGLTLTV QPKLGTMVCF
LSEAWPHEVS PTQCDRYAIA SWFRRNPGPL L