Gene Mmc1_1859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1859 
Symbol 
ID4481757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2309327 
End bp2309743 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content50% 
IMG OID639722601 
Productholo-acyl-carrier-protein synthase 
Protein accessionYP_865773 
Protein GI117925156 
COG category[I] Lipid transport and metabolism 
COG ID[COG0736] Phosphopantetheinyl transferase (holo-ACP synthase) 
TIGRFAM ID[TIGR00516] holo-[acyl-carrier-protein] synthase
[TIGR00556] phosphopantethiene--protein transferase domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.204233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTTG GTATTGGCAA TGATTTGGTC GAAATTCAGC GGTTGACCAA TATGTTGAAT 
AAAGGCCATG GCCAGCGTTT TTTAGAGCGC TGTTTTACGC AGCAAGAGCA ACAGCTATGC
AATGGGCGCA GCACGCCACA ACGTGCTTGT TGTTACGCCA AACGGTTTGC CGCCAAAGAG
GCGGTTATCA AAGCCCTTGG GGTTGGTTTT CGACAGGGGT TATGGTTTAC CGATATTGAA
GTGCTACCCA ATCAGTTGGG GCGGCCAACT GTAACCCTAC ACGGAGCCAC CGCCCAATGG
TTGGCTTGTC ATCATCCTGG CCAAGTTAAC ATTCACCTAA GCTTGAGTGA TGAAAAGGGA
CTGGCCATCG CCACCGCCCT TATTGAGTGC CACCCTTTGG CCATGGCACC TTCATAA
 
Protein sequence
MIVGIGNDLV EIQRLTNMLN KGHGQRFLER CFTQQEQQLC NGRSTPQRAC CYAKRFAAKE 
AVIKALGVGF RQGLWFTDIE VLPNQLGRPT VTLHGATAQW LACHHPGQVN IHLSLSDEKG
LAIATALIEC HPLAMAPS