| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1858 |
|---|
| Symbol | |
|---|
| ID | 4481756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 2307067 |
|---|
| End bp | 2309271 |
|---|
| Gene Length | 2205 bp |
|---|
| Protein Length | 734 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639722600 |
|---|
| Product | adenylate/guanylate cyclase |
|---|
| Protein accession | YP_865772 |
|---|
| Protein GI | 117925155 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4252] Predicted transmembrane sensor domain |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.88873 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAAAAAA TCAAAAAGAC CATTTGGTTT CGTTATGCGG GTAGTTTTCT GTTAGTACTG
ATTTTTTTAT TACTTTCCCT AAATATCATT CCCAGCACTC TATTCGTTCA ATTGGATCAT
CAGATCTATG ACACCCAGCT GCGTACCACG ATGCCCGGAC GCTTAGAGAG CCAAATCGTT
ATTTTAGATG TCGATGAGCG TTCACTTGCC CGTGTGGGTC GCTGGCCATG GCCACGAAAT
CAATTGGCGC AACTGGTTAA TACACTTTTT GATCAGTACC AAATCAATAG TTTAGGCTTT
GACTTTGTTT TTGCTGAGGA AGACAAAGCG GGCGGCTTAG AGGTTTTAGA ACACTTAGCA
ACAGGTCCTT TAAAGGATTT TCCCCTCTTT CAAACCACCT TTGCCAAATT GCGCCCTACT
CTGTTGCATG ACACCATCTT TGCGCGCGCC CTTACGGATC GACCGGTCGT CATGGGCTAC
TATTTTAAAC AACGGAATGA TAAAGGCGGG CAGAGTGGGC AATTGCCCCC GCCCTTAGCA
ACGTTGGATA AGCTCGAAGC CCAGCAATTC CCCGGCATGC AGCCTGAATC TTTTGGCGCA
AATTTACAAA TTTTGCAGAA CCAAGCCCGA GAGGGTGGTT TTTTTGACAA CCCCTTGGTG
GACCAAGATG GCGTTTTTAG GCGTGTGCCT TTGTTACAGG TACACAACGG CGGGATCTAT
GGTTCTTTGG CACTTAATCT TTTACGTACC GCATTGGGCA CCCCTACCCT TTCCATTTCC
CCCACAGGGG ATGCCATCTG GCTGGATGAT GGTGCGTTTC GCATTCCGGT CGATCGCGAT
ATGGCGGTAT TGGTACCCTA TATGGGGCCA CAAGGCAGTT TTCCCTATAT CTCAGCTGCG
GATGTGCTGG AAGGTCGCGT GGCACAGGAT AAGCTGGAGG GACGCATTGT GCTTATGGGT
ACCACTGCTC CAGGCTTGTT AGATCTGCGT TCAACCCCGG TGCAGCACGT CTACCCTGGG
GTTGAGATCC ACGCCAACAT CATCGCCGGT ATTATGGATG GCCGTATTAA ATCGCGCCCG
GCTGAAATGT TCTTGATTGA GCTAAGCGCG CTGCTGGTAT TGGGTATTCT GCTAACCCTG
CTGTTGCCGC GCCTAAGCCC TATGTTAGGC ACACTCTTGA CGGCCAGTTC GTTGGCTGCG
GTGGTGGTTG CTACTTTGTT GACTTGGCAA AAGGGTATGG TGATGCATGT GGGGCTGTTA
CTCAGCTTAA CCATTCTGCT TTACATCTAC CACATGGCCT ATGGTTTTTT TGTGGAATCC
CGCAGTAAGC GTCAGATATC CAAAACATTT GGACAATATA TTCCATCTGA ATTGGTGGAT
GAAATGACCG CCAGCGGCAG TGATGTCTCC ATTGGTGGTG AAAGCCGCAC CATGACGGTA
CTCTTTTCAG ATGTGCGCAG CTTTACCACC ATTTCAGAAG GATTAAAACC CGACGAATTA
ACCAGCCTTA TGAATAGCTT TTTAACCCCC ATGACACGGG TGATCCATGA AAACCGGGGC
ACCATTGATA AATATATGGG GGATGCCATT ATGGCCTTTT GGGGGGCTCC CTTACACGAT
CCAGAGCATA CCCGTCATGC GGTGCGCTCA GCCTTTCAGA TGATTGAAGC GATGCAGGCT
CTCTCTGTGG CATTTAAAGC CAAAGGCTGG CCCGAGCTAA AAATTGGTGT GGGGATTAAT
ACCGGCACCA TGAACGTGGG CAACATGGGC TCTGAATTTC GTATGGCCTA TACCGTGTTG
GGAGACGCCG TTAACCTCGG CTCACGGCTT GAAGGGCTGA CCAAACAGTA TGGGGTGGAT
ATTATTTTGG GTCAGGGCAG CAAGGCCGAA GTGGTTGATT TGGTCTGCCG GGAGTTGGAT
CTGGTACGGG TTAAAGGCAA GGCGGAACCG ATCGCGATTT ATGAACCGGT TGGCTTTACA
AGCGAGGTTG ATGAGGCGCG TTTGAGCGAG TTAGAACAGT ATCATCAGGC ATTATCACTC
TACCGTCAAC AGCAATGGCA AGAAGCTGAA GCGCTCTTAA CGGCACTGCA AACCGCTGAA
CCCTCACGGA TGATTTACCA AATTTATCTG GATCGTATTG CGCACTTTAA GGTCGAACCC
CCTGACGAAC TGTGGGATGG TGTCTTTACC CACACCTCTA AGTAA
|
|---|
| Protein sequence | MEKIKKTIWF RYAGSFLLVL IFLLLSLNII PSTLFVQLDH QIYDTQLRTT MPGRLESQIV
ILDVDERSLA RVGRWPWPRN QLAQLVNTLF DQYQINSLGF DFVFAEEDKA GGLEVLEHLA
TGPLKDFPLF QTTFAKLRPT LLHDTIFARA LTDRPVVMGY YFKQRNDKGG QSGQLPPPLA
TLDKLEAQQF PGMQPESFGA NLQILQNQAR EGGFFDNPLV DQDGVFRRVP LLQVHNGGIY
GSLALNLLRT ALGTPTLSIS PTGDAIWLDD GAFRIPVDRD MAVLVPYMGP QGSFPYISAA
DVLEGRVAQD KLEGRIVLMG TTAPGLLDLR STPVQHVYPG VEIHANIIAG IMDGRIKSRP
AEMFLIELSA LLVLGILLTL LLPRLSPMLG TLLTASSLAA VVVATLLTWQ KGMVMHVGLL
LSLTILLYIY HMAYGFFVES RSKRQISKTF GQYIPSELVD EMTASGSDVS IGGESRTMTV
LFSDVRSFTT ISEGLKPDEL TSLMNSFLTP MTRVIHENRG TIDKYMGDAI MAFWGAPLHD
PEHTRHAVRS AFQMIEAMQA LSVAFKAKGW PELKIGVGIN TGTMNVGNMG SEFRMAYTVL
GDAVNLGSRL EGLTKQYGVD IILGQGSKAE VVDLVCRELD LVRVKGKAEP IAIYEPVGFT
SEVDEARLSE LEQYHQALSL YRQQQWQEAE ALLTALQTAE PSRMIYQIYL DRIAHFKVEP
PDELWDGVFT HTSK
|
|---|
| |