| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1856 |
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| Symbol | |
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| ID | 4481754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2301440 |
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| End bp | 2303500 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639722598 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_865770 |
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| Protein GI | 117925153 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
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| COG ID | [COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00031284 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGAA TTTTAGTTAC CAGTGCTCTT CCCTATGCAA ACGGTCACAT TCATTTGGGC
CATTTGGTAG AATATATTCA GACCGATATC TGGGTTCGCT TTCACAAACT TCGTGGGGAG
GAGTGCATTT ACATGTGCGC CGATGATACC CACGGCACCC CCATTATGCT CCGTGCACAA
AAAGAAGGGA TTACGCCTGA GCAATTGGTC AACCAAATGC ACAAAGAGCA TGCCCAAGAT
TTTGCAGCTT TTTTCGTGCA ATTTGACGAA TATTACACCA CCAATTCAGA AGAGAACCGC
CTGCTTTCCG AAGAAATTTA CCTGAAAAAT AGGGATGGTG GCCATATTGA AGTGGATACC
ATCCAACAGG CTTACTGTGA ACATGATGCC ATGTTTCTGC CTGACCGGTT TATCCGCGGT
ACCTGTCCCC ACTGCGGAGC GGTGGACCAG TATGGGGATA GTTGCGAGGT GTGCAGCGCC
ACCTATCGCC CCACGGAGTT AAAAGAGGCC AAATGTGCGG TATGTGGCTC ACAGCCTGTG
GAAAAATCCT CTGAGCACTA CTTTTTTAAA TTACAGGACT TTAGTGACTA CCTGAAAGAG
TGGATTCAAT CAGGCACCCT ACAACCTGAG ATGGCCGCTA AACTCAATGA GTGGTTTGAA
CAAGGTCTTA AACATTGGGA TATCTCCCGC GATGGCCCCT ATTTCGGTTT TGAGATTCCC
GATGCGCCCG GCAAATATTT TTATGTCTGG TTGGATGCCC CAACAGGTTA CATGGCAACT
ACTTGGCACC ACTGTAAAAA ACAGGGCATA AACTTTGATG ACTATTGGCG CCGCGATGAT
AAGGCAGAGG TCTATCACTT TATCGGTAAA GATATTCTCT ATTTCCATAC CCTGTTTTGG
CCAGCCATGT TGCACGGTTC CGGATTTCGC ACCCCTACCG CAGTGTTTGC CCATGGCTTT
TTGACCGTTA ACGGTCAAAA AATGTCCAAA TCACGGGGTA CCTTTATCAA TGCACGCCAA
TATTCAGCGT TTTTAAATCC AGAATATCTG CGTTACTACT ATGCCGCCAA GCTAACCTCC
CGCGTGGATG ATCTGGATCT TAATCTGGAT GATTTTGTTC AGCGGGTAAA CAGTGATTTG
GTGGGTAAAG TGGTTAATTT GGCCTCTCGC ACCGCGGGTT TTATCGTCAA ACGTTTCGAG
GGGCAATTGT GCGCGGACTA TCCAGAAGAC GACGGGCTTT TTCAGCAATT TCACCAAGCC
GGCGAAGAGA TCGCCGCTCT CTACGAAAAG CGTGAATTTG CCAAAGCCAT GCAGGCCATC
ATGCGTTTGG CCGATAGCGC CAATCAATAT GTCGAAAACC ATGCGCCCTG GGTGTTGGCT
AAAGATCCCT TGCAAAGCCA GCGCCTGCAA CAGGTGTGCT CTGTTACATT AAATCTGTTC
CGAACCTTAA TGATCTTCCT CAAACCTGTT TTGCCTTATA TGAGCAACCA GGTTGAGCAG
CTCTTTAATG CGCCCCAACC CTTCGTTTGG CAGGATACCG CTGCGCCCTT ACAAGGGGTT
ACCATCAATG CGTTTAAGCA TTTGATGAGC CGCGTCGAGA AAGAAAAGGT CGATGCCATG
GTTGAGGCCG CGCGCGAAGA GGCCCCCTCC CCTACCCCGC AACCCAAGCA GCAAACCAAA
GAAAAAGAAG AAAAAAATAA AAAATCCGCT GACAAGGATG CGCTTGCTGC GAGCATTGAT
TTTGACACCT TTATGCAGGT GGACCTGCGG GTCGCCCGCA TTGCCGATGC CCATGAGGTA
GAAGGCGCAG ACAAACTTTT GCAATTGACC CTCGATTTGG GCGAAACCTT GGGCACCCGC
ACGGTGTTTG CGGGCATTAA ATCCAGCTAT AGCGCCGAGC AACTCAAGGG CCGTTTAACC
GTTGTGGTGG CCAACCTGGC ACCCCGTAAA ATGAAATTCG GTATCTCAGA GGGAATGGTT
TTAGCCGCAG GCCCTGGCGG GACCGATATT CACATTCTCT CCCCAGATAG TGGTGCCCAG
CCAGGGCAGC GCATCAAATA A
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| Protein sequence | MRRILVTSAL PYANGHIHLG HLVEYIQTDI WVRFHKLRGE ECIYMCADDT HGTPIMLRAQ
KEGITPEQLV NQMHKEHAQD FAAFFVQFDE YYTTNSEENR LLSEEIYLKN RDGGHIEVDT
IQQAYCEHDA MFLPDRFIRG TCPHCGAVDQ YGDSCEVCSA TYRPTELKEA KCAVCGSQPV
EKSSEHYFFK LQDFSDYLKE WIQSGTLQPE MAAKLNEWFE QGLKHWDISR DGPYFGFEIP
DAPGKYFYVW LDAPTGYMAT TWHHCKKQGI NFDDYWRRDD KAEVYHFIGK DILYFHTLFW
PAMLHGSGFR TPTAVFAHGF LTVNGQKMSK SRGTFINARQ YSAFLNPEYL RYYYAAKLTS
RVDDLDLNLD DFVQRVNSDL VGKVVNLASR TAGFIVKRFE GQLCADYPED DGLFQQFHQA
GEEIAALYEK REFAKAMQAI MRLADSANQY VENHAPWVLA KDPLQSQRLQ QVCSVTLNLF
RTLMIFLKPV LPYMSNQVEQ LFNAPQPFVW QDTAAPLQGV TINAFKHLMS RVEKEKVDAM
VEAAREEAPS PTPQPKQQTK EKEEKNKKSA DKDALAASID FDTFMQVDLR VARIADAHEV
EGADKLLQLT LDLGETLGTR TVFAGIKSSY SAEQLKGRLT VVVANLAPRK MKFGISEGMV
LAAGPGGTDI HILSPDSGAQ PGQRIK
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