Gene Mmc1_1852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1852 
Symbol 
ID4481750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2297453 
End bp2298289 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content55% 
IMG OID639722594 
Producthypothetical protein 
Protein accessionYP_865766 
Protein GI117925149 
COG category[S] Function unknown 
COG ID[COG3494] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000781514 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCATCA TTGCTGGCAG CGGTGCGATT CCTGCGCTGC TCATTGATAA GTTGCGCCAT 
TGTCACCATA CGGCTGTGGT TGTGGCTGCC CACGTGGGTG AGGCCGATCC CAAACTGACC
CAGTTAGCCG ATGCCATTGA GTGGGTTAGA TTGGGGCAAT TTAAGCGGAT TCTACGCTTT
TTTCACGCTC AAGGGGTTAC CCACATTGTT ATGGTGGGGG GCATTACCAA GACCCAGATC
TGGAACATTC GCCCCGATAC CCTCGCTTTA AAGATTGCTA CCCGTCTCAA ACATATGCAG
GATGATCACC TGCTACGGGC CATTGCCGAA ACCTTAGAAG AGCGTGGTTT TGTGGTTTGT
GGTGCCCATG AATTGGCCCC CGAGCTGTTA GCCCCGGTGG GCATTTTGGG CCACCACCGC
CCAAATTCTG AGTTATGGCA AGATATGCGG TTGGGCTGGC AGATGGCCAA AGCGATCGGT
GCCTTGGATA TTGGTCAAGG GGTGGTGGTA CGTGAGCGCG TGGTGTTGGC GGTGGAGGCG
GTGGAGGGCA CCGATGCTAT GCTGCAACGC GCAGGCAAGT TAAGCCGGGG TGGTGGCTGT
TTGGTCAAGG TGAGTAAACC ACAGCAAGAC TTACGCTTAG ATATGCCCAC CATTGGCGTG
GCGACCATTC AAAATTTGCA TCGTGCGGGC CTGCGTGGTT TGGCGGTGGA GAGTGGTTCC
ACGTTGATCG TAGACTATAT CGGCATGTTG GCAGAAGCCG ACCGACTAGG GATTGTGGTG
GTTGGCTGTG ATGCCGCCCA GATGACGGAT AACATGGGAA GGGAAGGGCC ATTATGA
 
Protein sequence
MGIIAGSGAI PALLIDKLRH CHHTAVVVAA HVGEADPKLT QLADAIEWVR LGQFKRILRF 
FHAQGVTHIV MVGGITKTQI WNIRPDTLAL KIATRLKHMQ DDHLLRAIAE TLEERGFVVC
GAHELAPELL APVGILGHHR PNSELWQDMR LGWQMAKAIG ALDIGQGVVV RERVVLAVEA
VEGTDAMLQR AGKLSRGGGC LVKVSKPQQD LRLDMPTIGV ATIQNLHRAG LRGLAVESGS
TLIVDYIGML AEADRLGIVV VGCDAAQMTD NMGREGPL