Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1846 |
Symbol | |
ID | 4483999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 2290717 |
End bp | 2291877 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639722588 |
Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
Protein accession | YP_865760 |
Protein GI | 117925143 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0280991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCAGCA AGGGGATCGC CATATTGGGC TCCACGGGCT CCATTGGAGT CAATACCTTG GATGTCTGCG CCCAGCATCC GGATCGCTAC CGAGTGGTGG CACTCAGCGC AGGGCAAAAC AGCGCCCGCA TGATTGCACA GGCCAAGCAT TTTCGGCCCG AAGTGGTTGC CATGGCCGAC ACCAAGGCCG CCGCAGAGGT AACCGAAGCA TTGGCAGGGG AAAATATCCG AGTTTTAGCG GGCGAAGAGG GGGTGATCGA GGTCGCCAGT TGGGCGTCGG CTCAGATGAC GGTTTCGGCC ATTGTCGGTG GGGCGGGGTT GCGCCCCACA TTGGCAGCCA TTCGGGCGCG TAAAGATATA GCCTTGGCCA ACAAAGAGTG TCTGGTTATG GCGGGCAGTC TCTTTATGGC CGAGATTGGT CGCTATCAGG TACGTCTGAT CCCGGTTGAC TCAGAACACA GCGCCATTTT TCAGGTCTTC CAGAACAGTA ACTGGATGCG CCGGTTGGTG TTAACCGCCT CAGGTGGCCC GTTTCGAGGC TGGAGACGCC AGCAGTTGCA TGGGGTCACC CCCGCCCAAG CGGTGGCACA CCCCAATTGG AGCATGGGGC GTAAAATCTC CGTTGACTCC TCCACCATGA TGAATAAGGG GCTGGAGGTC ATTGAGGCCC ATTGGCTCTT TGGTTTGCCC GCTGAACAGA TTGATGTGGT GGTGCACCCA CAGAGCATTG TGCACTCTAT GGTTGAATAT CAGGATGGCT CGGTGTTGGC GCAGATGGGG GTTCCGGATA TGCGCACCCC CATTGCGGTG GCGCTGGCTT GGCCGGAGCG CATTCCAACC ACGGTGAAGA GTCTGGACCT GCCAAAATTG GGGCAACTTG ACTTCTATGA TAAACCGGAT AAGCGTGATT TTCCCTGCCT TGAGTTGGCC TACGAGGCAC TGCGACGGGG AGGTATTGCG CCGGTTGTGC TCAATGCCGC CAATGAAATC GCCGTGGCGG CTTTTCTGGA AGGGGCGATT GGCTATCTTG AGATTGCTGA TTTGATTGTG AAAACCATGG ATTATTTAGG GCATGCGCCC ATTGAGAGCA TTGATCATCT GTTTGCGGTA GATCTTCAGG CACGCATGAC GGCACAGCAG TTGGGGCGTT TGGCCCATTA A
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Protein sequence | MSSKGIAILG STGSIGVNTL DVCAQHPDRY RVVALSAGQN SARMIAQAKH FRPEVVAMAD TKAAAEVTEA LAGENIRVLA GEEGVIEVAS WASAQMTVSA IVGGAGLRPT LAAIRARKDI ALANKECLVM AGSLFMAEIG RYQVRLIPVD SEHSAIFQVF QNSNWMRRLV LTASGGPFRG WRRQQLHGVT PAQAVAHPNW SMGRKISVDS STMMNKGLEV IEAHWLFGLP AEQIDVVVHP QSIVHSMVEY QDGSVLAQMG VPDMRTPIAV ALAWPERIPT TVKSLDLPKL GQLDFYDKPD KRDFPCLELA YEALRRGGIA PVVLNAANEI AVAAFLEGAI GYLEIADLIV KTMDYLGHAP IESIDHLFAV DLQARMTAQQ LGRLAH
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