Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1843 |
Symbol | |
ID | 4483996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 2288170 |
End bp | 2288727 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639722585 |
Product | ribosome recycling factor |
Protein accession | YP_865757 |
Protein GI | 117925140 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0233] Ribosome recycling factor |
TIGRFAM ID | [TIGR00496] ribosome recycling factor |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.773787 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATTC CCTTGATCAA GGATCTGGAA CAGCGCATGA ACAAGAGCCT TGCTGCGCTA AAAGATGAGC TTGCAACGGT GCGCACAGGG CGTGCCTCCA CCAGTTTGTT GGATGCCGTC ATGGTCAACG CCTATGGCAG CATGATGCCC CTTAATCAGG TGGCCTCCAT GACCGTACCC GAGGCCCGCA TGATCAATGT TCAGCCCTGG GACAAGGGAC AGCTGGGTGC CATTGAGAAA GCCATTCGCG ATGCGGATTT GGGCTTAAAC CCATCTAATG ACGGACAAAT TGTACGCGTA CCTCTGCCTG AGTTAACAGA AGAGCGCCGC AAAGATCTGG TTAAATTGGT GCATAAATAC AGCGAAGCAT GCAAAATTGC TGTACGCAAT ATTCGTCGTG ATGGTATCGA AGGCTTGCGC AAAGCCGAGA AAAACAAAGA GATCTCTCAA GACGAAATGC ATACGCAAGA GAAACTGGTG CAGGAGTCGA CCGATAAGTT TATTAAGCTT ATTGATGAAG CCATTGTGAG TAAAGAAGCC GATATTATGC AGGTGTGA
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Protein sequence | MSIPLIKDLE QRMNKSLAAL KDELATVRTG RASTSLLDAV MVNAYGSMMP LNQVASMTVP EARMINVQPW DKGQLGAIEK AIRDADLGLN PSNDGQIVRV PLPELTEERR KDLVKLVHKY SEACKIAVRN IRRDGIEGLR KAEKNKEISQ DEMHTQEKLV QESTDKFIKL IDEAIVSKEA DIMQV
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