Gene Mmc1_1843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1843 
Symbol 
ID4483996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2288170 
End bp2288727 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content49% 
IMG OID639722585 
Productribosome recycling factor 
Protein accessionYP_865757 
Protein GI117925140 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.773787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTC CCTTGATCAA GGATCTGGAA CAGCGCATGA ACAAGAGCCT TGCTGCGCTA 
AAAGATGAGC TTGCAACGGT GCGCACAGGG CGTGCCTCCA CCAGTTTGTT GGATGCCGTC
ATGGTCAACG CCTATGGCAG CATGATGCCC CTTAATCAGG TGGCCTCCAT GACCGTACCC
GAGGCCCGCA TGATCAATGT TCAGCCCTGG GACAAGGGAC AGCTGGGTGC CATTGAGAAA
GCCATTCGCG ATGCGGATTT GGGCTTAAAC CCATCTAATG ACGGACAAAT TGTACGCGTA
CCTCTGCCTG AGTTAACAGA AGAGCGCCGC AAAGATCTGG TTAAATTGGT GCATAAATAC
AGCGAAGCAT GCAAAATTGC TGTACGCAAT ATTCGTCGTG ATGGTATCGA AGGCTTGCGC
AAAGCCGAGA AAAACAAAGA GATCTCTCAA GACGAAATGC ATACGCAAGA GAAACTGGTG
CAGGAGTCGA CCGATAAGTT TATTAAGCTT ATTGATGAAG CCATTGTGAG TAAAGAAGCC
GATATTATGC AGGTGTGA
 
Protein sequence
MSIPLIKDLE QRMNKSLAAL KDELATVRTG RASTSLLDAV MVNAYGSMMP LNQVASMTVP 
EARMINVQPW DKGQLGAIEK AIRDADLGLN PSNDGQIVRV PLPELTEERR KDLVKLVHKY
SEACKIAVRN IRRDGIEGLR KAEKNKEISQ DEMHTQEKLV QESTDKFIKL IDEAIVSKEA
DIMQV