| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1829 |
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| Symbol | |
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| ID | 4480445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2268642 |
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| End bp | 2270906 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639722571 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_865743 |
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| Protein GI | 117925126 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000110456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTAC TCTTCGTAGA TGATATGGCC ACCGTGCGCA TGCTCTATGG GCGTTTGCTC
AGCATGGCTG GTTACAAAGT AGTTTTAGCT GACTCGGTGA ACGATGCTTT GGCTAAAGCC
CGCATCGAAC GCCCCCCCTT GGCCATTGTG GATTACCACA TGCCTGACGG TACCGGGGCA
GATCTTACCC GCGCCCTATT GGCCACACCT GAGACCTCAG ATATTTTGGT GGTCATGCAC
TCCCAAAGCC TTGATGTTAT TTCTGAATCC TTAGAAGCTG GGGCAATTGA TCTTATCCAT
AAAGAGGACC CTAAAGAGGT TTTTCTCATG CGGGTCGCTG CCATGGGGCG TTTTATTGAA
ACACAAAACG CCCATCGCGA AGCAGAAGCC CATGCCCGCC AAAAAGAGCT ACAAGCCGCC
GAGCAGCTGC GCCGTATTGA AGAGCAAGCC CGTCAACAAC TGGAACAGCG GGTTAGAGAG
CGCACCTTAG AGCTAACCCA GTCCAACGAA CGGCTTAGCA ATGAAGTGGC TGTGCGGATG
CGGGCTGAAA GCGGTTTAAG ATTGATCCAT AAGGTGTTTG AAAACACCTC CGAAGCCATT
ATCCTGACCG ACCCTCAAGG GATGATCCTC GATATAAATC CGGCTTTTAC GGAGATCACC
GGCTTTAGCC GTGAAGAGGC TTTGGGGCAC AATCCCAGAT CTTTTAAATC CGACCGGCAT
GATGCCACTT TTTACACCAA CATGTGGCGT AAAATTGCAG AAGAGGGGTT CTGGCAGGGA
GAGATATGGG ATCGTCGTAA GAATGGCGAG ATCTACCCCA AACGCTTAAC CATCAATGCT
GTGCGCAATC AAGCCGGAGA GGTGGAAAAC TATATTGGTA TTTTTTCCGA CATTAGTGAA
AGCAAAGCCA CGGAATTAAA GCTTGAACGG CTGGCCTATT ATGACGCCTT GACCCAGTTA
CCCAACCGAA TGCTGTTTCA TGATCGCTTG GAGCATGAGT TTTACAATGC CCAACGGCAT
CGAAAACAGG TGGCGGTCTT TTTTATTGAT TTAGATCGTT TTAAACAGGT CAATGATACC
CTGGGACACA GCGCCGGTGA TGAGCTGTTA CAGCATGTGG CCCAGCGGTT GGAAGGGTGC
GTGCGGGCGG CTGATACGGT TGCCCGAATG GGTGGCGATG AGTTTACCGT TATCCTTGCC
GACATCAGCG ACAATGAGAG CGTGGCACGG GTTGCCCGCA AAGTGCTTGA AGAGCTGCAA
AAAAGTATTT CAATCAAGGG TCACGATATT TTTGTGGGGG CCAGCATTGG TATTGCCCTT
TATCCGGACA ATGGTAACGA TGTTGAAACC CTGACTAAAA ATGCGGATAT GGCGATGTAT
CGGGCCAAGG AGAGCGGGCG GGGCAACTAT AAATTCTTTA GCGAAGAGAT GAACGTTAGC
ACCAGTCAAC GTCTCTCTTT GGAATCTCAG CTGCACCATG CCGTTAACGC CAATCTATTG
GAGGTCTATT ACCAACCCAA ACTCAACATG CAAAGTGGTA TCATGGTGGG CATGGAGGCG
CTGGTACGTT GGCCACAAGC GGATGGCTCG ATGATCCCCC CTATCCAGTT TATTCCAGTT
GCCGAAGAGA CCGGCCTCAT TGTACCCCTT GGCCGTTTGG TGATGCGCCA AGCCATGCTG
GATTGCGCTC GGTGGGTGCG TGAAACCGGC ATGAACCTGC GGGTTGCCGT GAACCTCTCT
GCCCGTGAGT TTCAGTCCCC TGGATTGGTC GTTGAAATTG AGCAAACCCT CGCCGAGTGC
GGCCTAGATG CCCGCCACTT TGAAGTGGAG ATTACCGAAA GCTTGATGAT GCATGATGTG
GAAAATGCCA TTGCAACCCT TGAGCAGATC AGCCGCTTGG GGATTCATAT TGCCATGGAT
GATTTTGGCA CGGGCTATTC ATCCCTAAGC TATTTAAAGA AATTTCCCAT TCATTCCCTT
AAAGTGGACC GCTCTTTCGT CAAAGATATC CCCGACGATC CCAATGATAT TGAGATTGTA
GCGGCGATTC TCTCTCTGGC TAAAGTTCTT AATCTCAAAG TGGTTGCTGA AGGGGTCGAG
ACTCAAGAGC AGCTCTCGTT CCTGCGCCAA AATTTGTGTG ACGAGTGCCA AGGCTACTCT
TTTTCAAAGC CCCTTTCCGC TGTGGACTTT ACCGCCTTCT TGGCCGATGT TCACAACCAT
AGCGCCCGCC TTATGAACAA CGATTTTGAG GTAATGTTAA GCTGA
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| Protein sequence | MKVLFVDDMA TVRMLYGRLL SMAGYKVVLA DSVNDALAKA RIERPPLAIV DYHMPDGTGA
DLTRALLATP ETSDILVVMH SQSLDVISES LEAGAIDLIH KEDPKEVFLM RVAAMGRFIE
TQNAHREAEA HARQKELQAA EQLRRIEEQA RQQLEQRVRE RTLELTQSNE RLSNEVAVRM
RAESGLRLIH KVFENTSEAI ILTDPQGMIL DINPAFTEIT GFSREEALGH NPRSFKSDRH
DATFYTNMWR KIAEEGFWQG EIWDRRKNGE IYPKRLTINA VRNQAGEVEN YIGIFSDISE
SKATELKLER LAYYDALTQL PNRMLFHDRL EHEFYNAQRH RKQVAVFFID LDRFKQVNDT
LGHSAGDELL QHVAQRLEGC VRAADTVARM GGDEFTVILA DISDNESVAR VARKVLEELQ
KSISIKGHDI FVGASIGIAL YPDNGNDVET LTKNADMAMY RAKESGRGNY KFFSEEMNVS
TSQRLSLESQ LHHAVNANLL EVYYQPKLNM QSGIMVGMEA LVRWPQADGS MIPPIQFIPV
AEETGLIVPL GRLVMRQAML DCARWVRETG MNLRVAVNLS AREFQSPGLV VEIEQTLAEC
GLDARHFEVE ITESLMMHDV ENAIATLEQI SRLGIHIAMD DFGTGYSSLS YLKKFPIHSL
KVDRSFVKDI PDDPNDIEIV AAILSLAKVL NLKVVAEGVE TQEQLSFLRQ NLCDECQGYS
FSKPLSAVDF TAFLADVHNH SARLMNNDFE VMLS
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