| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1818 |
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| Symbol | |
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| ID | 4480434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2252730 |
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| End bp | 2253788 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639722560 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_865732 |
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| Protein GI | 117925115 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000224471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.900766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGAT TCTATAAGCC ATCATTACCG CTGTTTTATC TGTTACTCAT GCTGCCCGTT
TGCTCACTAC AGGCCGCCAG CTTAGTCACA ACCCCGGCCA TAAACCGAGA ACTCCCCGTA
TGGTTGACAC TCGATGGTGT GGTAGAGGCC GAAAACCAAG CCACCATAAC GGCGAAAACA
TCCGGTGAAA TCATAGAATT AAACTTTGAC GTTAACGATT ATGTACATAA AGGGGATGTG
CTACTACGCT TTAAAAATCA GCGTAATCAG GCCGAAATCG CCCAAGCCCG TGCCTCCGTC
GCCCAAGCCA AAGCGCAACT GACGGAAGCA CAAAACAGTT ATGACCGTTC CGTGCAATTG
TTGGAAAAAA AGGTGGTCAG CAGTGCCAAA ATGGACCAAA CAGAGTCCGC CCTAAAAGCG
GCCAAGGCTC AATTAGAGTT GGCTAACGCT GGACTAACCA TCGCCCTGGA TAAACAAGAG
GATCATGTCG TGCGCTCCCC TTATTCAGGA TACATGCTTA AACGGCATGT GGATCCTGGT
GAAAATGCCC AAGCTGGCCA AGCGCTTTTT ACAGGCATTT CACTGGATGC CTTGCGGGTC
CATGTTATGG TGCCACAAAG TCGCATTGCT GCCGTGCGCC GCTTTAATGA AATGGCCATT
AAACTGGCCG ATGGTCGTCA AGTCACCCCC AAGGATATCA CCTTTTTCCC CTATGCCCAC
GCAGCCAGTC ATGCCTATGG GGTACGGTTA CACCTGCCCG AGGGACTCGA CAACCTTTAC
CCCGGTGCCC TGGTGCGGGT GCAGTTTGTC ACCGGGAGCA AACAGCGGGT ATTAATTCCC
GTGCCGAGCG TTGTCACACG TAGCGAAGTA ACGGCAGCCT ATGTGGTGGA CGGTGGCGGC
CATGTCTCGT TGCGGCATCT ACGCACCGGG CGAACCTATG CAGATTTGAT CGAGGTGCTG
GCCGGACTTG AGAGCGGTGA GCAGGTCGCC GTGGATCCCG TGTTGGCGGG GCAACAAGCG
CGTGCCCAGC TGCCCAGTAT GGAGGCTTAT CATGAGTGA
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| Protein sequence | MRRFYKPSLP LFYLLLMLPV CSLQAASLVT TPAINRELPV WLTLDGVVEA ENQATITAKT
SGEIIELNFD VNDYVHKGDV LLRFKNQRNQ AEIAQARASV AQAKAQLTEA QNSYDRSVQL
LEKKVVSSAK MDQTESALKA AKAQLELANA GLTIALDKQE DHVVRSPYSG YMLKRHVDPG
ENAQAGQALF TGISLDALRV HVMVPQSRIA AVRRFNEMAI KLADGRQVTP KDITFFPYAH
AASHAYGVRL HLPEGLDNLY PGALVRVQFV TGSKQRVLIP VPSVVTRSEV TAAYVVDGGG
HVSLRHLRTG RTYADLIEVL AGLESGEQVA VDPVLAGQQA RAQLPSMEAY HE
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