Gene Mmc1_1811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1811 
Symbol 
ID4483691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2241442 
End bp2242410 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content52% 
IMG OID639722553 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_865725 
Protein GI117925108 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000728339 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.835393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGTGA GTGTGCTTTT GTTTAAGGAC AAGGGAGTAA ATAAACCAAT GTTGAAGTCC 
AAGACCAAAC TTTTTTTGTC GATGGCTGCG GTAATATCTT GCATGGCAGT CGTTTCGGCT
TCCCAGGCGG AAGAGGCCTA TAAAGGATGG ATCCAATGGC ATCCGCAAAC GGGTCCCAAT
ACCATTTCTA CAGCAGGCAC CCAGTATTAT CCCTATCAAC CCAGCCCAAA GCCCGCTTGT
GAGCATGGTA TGGATGCTGC GGGCAACTGC GTGGGAGATG CGGACGGCGA TGGCGTAACC
GATGGCAAAG ACAAATGCCC TGGTACCCCT GCTCAGTATG CCGTAGACGC TGTGGGTTGC
TCCTTAGATC GGGATGGCGA TGGGGTTAAC GATGCTATGG ATCGTTGTCC CGATAGCAGA
AAAGGCGTAA AAGTTGATGC CCGTGGCTGC GAACTGGACG ATGATCAGGA TGGTGTGGTT
AATAGCGATG ACAAATGCCC CGGCACCAGT GTGCATGTTA AGGTGGATGC CACCGGCTGT
GAAATCAGCA AGGATGGGGA TATGGATGGC GTATTGAATG AGCAAGACGC CTGTTTGGAT
ACCCCCAAAG GTCTGCCCGT AGGGAAAAAT GGTTGCTGGT CGGTTAACTC GATCCACTTT
AATACCGGAT CTTGGGAGCT GGATGCCAAG GCGCTTTCAG TGTTGAATGC TGCGGTTGCA
ACCATGAAGC AGCATGCGGC CATCCGTGTT GAGGTGCAAG GCCATACAGA CAGCCGAGCT
GATGACACCT TTAACAAAAA GCTCTCTCTT AAGCGCGCTG AATCGGTTAT TTGGTACATG
ACCAAGCAAG GCTTGGCACG TGACCGTTTT GTCGCCGCAG CTTTTGGTGA GCAAAAACTG
CTCAACAGCG AGAAAAACAG TGACGAGCGG TTAGTCAACC GTCGCGTTGA GTTGCACCGC
ATTCCCTAA
 
Protein sequence
MHVSVLLFKD KGVNKPMLKS KTKLFLSMAA VISCMAVVSA SQAEEAYKGW IQWHPQTGPN 
TISTAGTQYY PYQPSPKPAC EHGMDAAGNC VGDADGDGVT DGKDKCPGTP AQYAVDAVGC
SLDRDGDGVN DAMDRCPDSR KGVKVDARGC ELDDDQDGVV NSDDKCPGTS VHVKVDATGC
EISKDGDMDG VLNEQDACLD TPKGLPVGKN GCWSVNSIHF NTGSWELDAK ALSVLNAAVA
TMKQHAAIRV EVQGHTDSRA DDTFNKKLSL KRAESVIWYM TKQGLARDRF VAAAFGEQKL
LNSEKNSDER LVNRRVELHR IP