| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1809 |
|---|
| Symbol | |
|---|
| ID | 4483689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 2238940 |
|---|
| End bp | 2239965 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639722551 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_865723 |
|---|
| Protein GI | 117925106 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000141679 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAGATC ACGAACCCCA TCAGCCCCCT CTCCCCCAGC AAGGCAACGA GAAGTTCACG
GCTCCCCCAC CCCAACCCAA TATGATTGAG GTGGATGATC TTTTTTTTGA ATATCCTGGC
CGCCGAGTCC TTGATGGCAT TAGCTTTACC CTGCCACGTC AGAGCATTAC CGCACTGGTT
GGCAACAATG GTGTGGGCAA AACCACCCTC ATGCGTTCCC TAGCCGGTCT GCACCCCCCC
TTCTCGGGCC AAATACGGGT TGCTGGCATT GATGTCATCC GCCACCCGCG ACGCTGCCAT
AGAAAAATTG GCTATCTGGC GGATTTTTTT GGGCTCTATG ATGATCTCAC CGTCTCTCAA
TGCCTGCTGC ATGCCGCAAG GGCCCACGGT TTAAGCCCTC AAGATGCCTC GCAACTACGC
GATGGAGCCG TAGAACGGCT GGGTTTAAGT GCCCACATTA ATAGCCGCTC GGGGCACCTC
TCTCGGGGTC TGCGGCAGCG GTTGGCGATT GGCCAAGCCA TTGTGCATGA ACCCCAAGTG
TTACTGCTTG ATGAACCCGC CTCCGGTTTA GACCCCGATG GCCGCCGGGC ACTCTCGCAA
CTGCTGCTCG AATTGCAAGA GTATGGTATG ACCATCATGG TCTCATCCCA CATTCTTGCC
GAGTTGGAGG AGTATTCCAG CCATATGCTG GTCCTACGGG ACCGTAAACA TATTGATTTG
CAACCCATTA TGCCAACGCC AACCACCACC GAACGGCGCT TACGCCTCAT GCTTTCCCAG
CCTTATGATC CCCTACTGGC TCTGTTGCAA GCCCATCCGG CCATTAGCGA AATTGAGACC
AACCAACATC GCGCAACGTT CCTGTTCCTA GGCTCCGCTT TGGATCAGCA GCAATTGCTG
CATCAATTGG TGGTACAACA GGTTCCCATC TACAGCCTTT CCGAGGAACG CTTGCACCTA
CAGGATGCCT ATCTGCGCCA TATGCACAGC ACCCCCAGCG AAGAGACGGC CCTCTATGCG
CCTTAA
|
|---|
| Protein sequence | MLDHEPHQPP LPQQGNEKFT APPPQPNMIE VDDLFFEYPG RRVLDGISFT LPRQSITALV
GNNGVGKTTL MRSLAGLHPP FSGQIRVAGI DVIRHPRRCH RKIGYLADFF GLYDDLTVSQ
CLLHAARAHG LSPQDASQLR DGAVERLGLS AHINSRSGHL SRGLRQRLAI GQAIVHEPQV
LLLDEPASGL DPDGRRALSQ LLLELQEYGM TIMVSSHILA ELEEYSSHML VLRDRKHIDL
QPIMPTPTTT ERRLRLMLSQ PYDPLLALLQ AHPAISEIET NQHRATFLFL GSALDQQQLL
HQLVVQQVPI YSLSEERLHL QDAYLRHMHS TPSEETALYA P
|
|---|
| |