Gene Mmc1_1797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1797 
Symbol 
ID4483677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2224709 
End bp2225929 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content53% 
IMG OID639722539 
Productpermease 
Protein accessionYP_865711 
Protein GI117925094 
COG category[R] General function prediction only 
COG ID[COG0701] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000323943 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGATGG TTCTCATTTG TTGTTCGTGT TTTGCACAGG AGTTTAGGGT GGCAACTTTT 
TTTTCAGTTT GGATCGATCT GCTCCAGGAT GTCACACCGT GGTTATTTTT TGGACTGCTG
CTGGCTGGCT TTATCAAGGT GTGGGTACCT GAACATTGGG TGGCAGGTTT TTTGGGCGGC
AAGGGTGTTA AGCCCATATT CTGGGGGGCG ATCATCGGCG CGCCTTTGCC GCTCTGCTCC
TGTAGTGTCA TCCCCATGGC CCTTTCCCTG CGCAAACAAG GGGCTTCGAA AGGTTCTACA
GTCTCTTTTC TCGTGGCAAC ACCTGAAACA GGGGTAGATT CCATTGCCAT CTCCTGGATC
ATGTTAGGGC CTTGGCTCAC CCTTATGCGA CCCATCTCGG CGGTATTATG CGCCATATTG
GCCGGGCTGC TTACTTGGTG GTGGCAGCGT CTGACACCAA GCCCAACCAT CCCCGAGCAC
GCTTCTTTAA GCACCCCGCC AAACCGTGTA ACGCTGGCGC TTAGCCCAGC ACCCCTGGCA
CGTGATGCAG GGGTACAACC GCTTACCCTA AATGAAAAAA CGGCCCAGTA TAATCCAATG
TCAACGGCAT GTGGTACCGC GTGCGGTTGT GCCACAGCAC CCACAGCGGA TCAACCACAA
CCGTTTTGGC AGCGCCTCAA GCAGGCGATT CATTACGCAT TTGATGATCT ATTAAATGAC
CTGCTGCTGT GGATCTTTAT AGGGCTGCTG CTGGCGGCTT TGGTGATGGT TTGGGTACCA
CCCGGTACGT TGGGTTATCT GGCGGGGTGG GGAGTTTTGG GCATGTTGGC GATTATGTTC
ATGAGTGTGC CGATCTATGT CTGTGCGACC GCTTCAACGC CCTTAGCCGC CGCCATGTTA
CATGCAGGCA TCTCACCAGG AATGGCTTTG GTCTTTCTGC TAACCGGGCC GGCCACCAGT
TTGGTAACGC TGGCTCTGGT GGGTCGTGAA TTGGGGCGCA GCAGCTTAGT GACCTATCTC
TTGGGTATTG GATTTGGGGC AATCGCTTGT GGCATGGCCA CCGATGCGCT CTTTGCTTGG
ATGCAATGGC CTTTACAACT CTCTTTACAA GAGAGCAGCG GCCACAGTGA AACAGGATTT
GTTGCTTTGC TACAGTGGAG CAGCGTTGTA CTTTTTCTGG GCTTTAGCCT GCGCTATGGG
TGGAAACGTC TCTACGCTTA A
 
Protein sequence
MVMVLICCSC FAQEFRVATF FSVWIDLLQD VTPWLFFGLL LAGFIKVWVP EHWVAGFLGG 
KGVKPIFWGA IIGAPLPLCS CSVIPMALSL RKQGASKGST VSFLVATPET GVDSIAISWI
MLGPWLTLMR PISAVLCAIL AGLLTWWWQR LTPSPTIPEH ASLSTPPNRV TLALSPAPLA
RDAGVQPLTL NEKTAQYNPM STACGTACGC ATAPTADQPQ PFWQRLKQAI HYAFDDLLND
LLLWIFIGLL LAALVMVWVP PGTLGYLAGW GVLGMLAIMF MSVPIYVCAT ASTPLAAAML
HAGISPGMAL VFLLTGPATS LVTLALVGRE LGRSSLVTYL LGIGFGAIAC GMATDALFAW
MQWPLQLSLQ ESSGHSETGF VALLQWSSVV LFLGFSLRYG WKRLYA