| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1795 |
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| Symbol | |
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| ID | 4483675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2219242 |
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| End bp | 2221386 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639722537 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_865709 |
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| Protein GI | 117925092 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0771751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCC CTTCCAAACA GATGCTACTG CCGGCGCATT TTCCCAACCA ATGGATACCC
GTGGCCATTG TTGGGGTGGA TAAGCATGGC ACCCTCTGTT TTTATAACAG CCGAGCCCAC
ACTTTGCTGC AATTGCCAGA AGAGTGCAGT GGGCTCGACT TGAAAATAGA GGATTTTTTT
CATGATTTGG ATTCGAGCCG CCCTGATTTT GGCATGGCCG ACGAGTTTAT CTCTCGTCAA
CCAACCGCAC CGTTGGTGCG GTTTACCTTG GTCCATCCCT ATGATGCCCC CAACAAGCCT
GTTTCGGTCG AGGCCTATTT TTTACTTATG ACCCATGGGG ATGATGCTGG GCAATTATGG
ATCGCCTTTC ACTCCATGGA AGAGACCCGC CGACTTCAGG AGCGTTTGGA AAATACCGAA
GCGCTACTTG CCCAGTCTAA AGACCAATTA ACGTACTACG CTCGACTGGT GACAACCCTC
TACGACAATA CCCAAGAAGG GGTGTTGTTG CTGGATGATC AAGGCACGGT TCAAGCGGTT
AATAATGCCT ATACCATTAT TAGTGGCTAC CACTGGGAGG AGTTGCTCGG TAAAAGCGTC
TGTCTATGCC ACGGCGGCCT TTGTGAAGAG AGCAATGCTG AACTCCAAAC AATCCTCAGT
CATACCCGCT GTGATGGTAG TTGGGAAGTG CAGTGGCAAA ATAGCCGCCG CAATGGTGAA
TTTTATCTGG AGCAGATTCG TGTCACCATG ATCGAGGATC TTAACGGGAC CCCACAAAGT
TATGTGGTGG TGGTGCGTGA TTTAAGCTAT CAAGATAGCA GCATTAAAGG GGCACGCACC
GCCAGTCATG AGGATGCTTT GACAGGCCTA CCCAACCGGT CCCTGTTTGC CGACCGTTTG
GAGCAGGTTT TAACCCACGC CAAACGCAGT GGTGAAAAGG TCGCGGTTAT CCTGTTGGGG
TTGGATGGTT TTCGTAAAAT CAATGACTCC TTAGGGCACC AGATAGGGGA TCAAATTCTC
ACCATCATGG CCCAAAGATT TCAAACCAAT CTACGTGGTG GCGATACGGT TGCCCGGATG
GGCAGTGATG AATTTGGCTT TATTGCCCGT GATTTGATCT CAACGCAATC CATTTTATCG
GTGTTGGGAA AAATCAAGCG TACCTTGTCG GCCCCCATTA AGATTGCGGA TTCTGAGTTG
GTTTTTACCG CAGGCATCGG CATAAGCGTT ACCCCAGACG ACAGTCTCGA AACCGATACC
TTAATCCGCT ATGCCGATGC CGCTTTGGGT CGCGCCAAGG CGGGTGGTGG CAATATATTT
ACCTTTTTTA CACAAACCAT GGAGCAAAAC GCCTCTAAGC GGCTACACCT TGAGGGGCGC
CTACGTAAAG CCATTGAACA GGAAGAGCTA ACTTTATTTT ATCAAGCCAA AATAAGCTGC
GAAGATTCCC CTAAAATTTC AGGCTTTGAA GCCCTGGTTC GCTGGATAAC CCCCGAAGGC
GATATTATCT CTCCCGGAGA TTTTATCCCC ATCGCCGAAG AGACAGGATT AATTATCCCG
TTAGGTAGTT GGGTGATTGA TCGAACCTGT CGGGATATTG CCCATCTTCA GGCCCTGGGA
TTTCCCCCCG TTGTGGTTTC GGCCAATTTA TCCCCCCGCC AATTTGTGCA AGATGGGTTG
CTGCAAGTAG TGCAACAGGC TCTCGTGCAG CACGGCATTG ATCCCTGCTG GCTAGAGTTA
GAGATTACAG AAAGCTCTGT CATGGGCAGC GTGGACCAAG CGACCGAGCT GCTTAAATCA
CTGGTTGCGC TGGGGGTGCA TATTGCCCTG GACGATTTTG GTACAGGCTA CTCATCATTG
GCTTATTTAA AACGATTCCC CTTTCACACC CTCAAGGTGG ATCGGGCTTT TGTGCAGACC
GTGGAGAAGG ACCGGGCGGA TCAGGCCATT TTACAAGCCA TTGTATCCCT GGCGCGTAAT
TTAGAGCTTC AAGTGGTTGC CGAAGGGGTG GAAAACGAAG GGCAGCGTGA TTTTATTACC
CAAGCGGGCT GTCATTCCAT TCAAGGCTTT TATTACAGTA AACCCCTGCC TCTATCGGAA
GTTATGGAAA AGTGGGCTAC CTTAAGTCAA GGTCCCATGC GCTAA
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| Protein sequence | MKTPSKQMLL PAHFPNQWIP VAIVGVDKHG TLCFYNSRAH TLLQLPEECS GLDLKIEDFF
HDLDSSRPDF GMADEFISRQ PTAPLVRFTL VHPYDAPNKP VSVEAYFLLM THGDDAGQLW
IAFHSMEETR RLQERLENTE ALLAQSKDQL TYYARLVTTL YDNTQEGVLL LDDQGTVQAV
NNAYTIISGY HWEELLGKSV CLCHGGLCEE SNAELQTILS HTRCDGSWEV QWQNSRRNGE
FYLEQIRVTM IEDLNGTPQS YVVVVRDLSY QDSSIKGART ASHEDALTGL PNRSLFADRL
EQVLTHAKRS GEKVAVILLG LDGFRKINDS LGHQIGDQIL TIMAQRFQTN LRGGDTVARM
GSDEFGFIAR DLISTQSILS VLGKIKRTLS APIKIADSEL VFTAGIGISV TPDDSLETDT
LIRYADAALG RAKAGGGNIF TFFTQTMEQN ASKRLHLEGR LRKAIEQEEL TLFYQAKISC
EDSPKISGFE ALVRWITPEG DIISPGDFIP IAEETGLIIP LGSWVIDRTC RDIAHLQALG
FPPVVVSANL SPRQFVQDGL LQVVQQALVQ HGIDPCWLEL EITESSVMGS VDQATELLKS
LVALGVHIAL DDFGTGYSSL AYLKRFPFHT LKVDRAFVQT VEKDRADQAI LQAIVSLARN
LELQVVAEGV ENEGQRDFIT QAGCHSIQGF YYSKPLPLSE VMEKWATLSQ GPMR
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