Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1782 |
Symbol | |
ID | 4483662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 2202783 |
End bp | 2203802 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639722524 |
Product | aspartate semialdehyde dehydrogenase |
Protein accession | YP_865696 |
Protein GI | 117925079 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.017997 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00498224 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTACCT ATGATGTGGC AGTGGTTGGT GCCAGCGGCA ATGTGGGCCG CGAAATGCTC AAGATTTTAG AAGAGCGCAA CTTTCCTGTT GGAAAAGTCT ATGCGCTGGC TTCTGAACGC TCGGCGGGGA GCACCATTCC CTTTAAGGGC GGTGAGTTGG TGGTAGAAAA CTTGGAAAAT TTTGATTTTT CCAAGGTAGA GATTGGCCTT TTTTCACCAG GTGCGAGTGT GTCTAAAGTC CATGCCCCCC GCGCAGCGGC GGCGGGTTGT GTGGTGGTGG ATAACACCTC GTTTTTCCGC ATGGATCCCG ATGTGCCCCT GGTGGTACCG GAGGTAAATC CCGAGGCCAT TGGCGGGTAT AAAAAGAAGG GCATTATTGC CAACCCCAAC TGTTCCACCA TTCAGATGAT GGTGGCCCTC AAGCCCATTC ATGATTTGGG GACCATTGAG CGTGTGGTGG TAAGTACCTA TCAAGCGGTT TCCGGGGCGG GTAAAGATGC CATGGATGAG CTGTTTGAAC AGACTCGCGC CAAATATGTG GAGACGCTTG AGGTTCCGCC GAAAAAATTT CCCAAAGAGA TCGCCTTTAA CTTGATCCCG CAGATTGATC TCTTCTTGGA GAATGGCTAC ACCAAAGAAG AGATGAAAAT GGTCAATGAG ACCAAAAAAA TTCTGGATCC CAGCATTGCT GTGACCGCCA CCTGTGTGCG GGTTGGGGTG TTTAATGGCC ATTCGGAATC GGTCAATGTG CAGACCAAGC ATAAGGTGAC GGCAGCTCAA GCCCGCGAGG CGCTGCAAAA GATGGATGGG GTGGTGGTGG TGGATGATCC TTCCCAGGGT CACTATATTA CCCCGGCGGA GGCTTCTGGT AAGGATGCCA CCTATGTCTC GCGCATTCGG GAAGATGAGA GCCACGAAAA CTGCCTGAAC TTTTGGTGTG TATCGGATAA CCTACGTAAA GGCGCGGCGC TCAATGCGGT GCAGATTGCC GAAGTTTTGA TCCGGGATTA TCTCAAATAA
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Protein sequence | MRTYDVAVVG ASGNVGREML KILEERNFPV GKVYALASER SAGSTIPFKG GELVVENLEN FDFSKVEIGL FSPGASVSKV HAPRAAAAGC VVVDNTSFFR MDPDVPLVVP EVNPEAIGGY KKKGIIANPN CSTIQMMVAL KPIHDLGTIE RVVVSTYQAV SGAGKDAMDE LFEQTRAKYV ETLEVPPKKF PKEIAFNLIP QIDLFLENGY TKEEMKMVNE TKKILDPSIA VTATCVRVGV FNGHSESVNV QTKHKVTAAQ AREALQKMDG VVVVDDPSQG HYITPAEASG KDATYVSRIR EDESHENCLN FWCVSDNLRK GAALNAVQIA EVLIRDYLK
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