| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1771 |
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| Symbol | |
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| ID | 4482597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 2190208 |
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| End bp | 2190801 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639722513 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_865685 |
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| Protein GI | 117925068 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000506111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000648476 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAACGAAG CCGATGAGAT CTTGGTAGAA AAAACCAAGC AGGGCGATAA AAAAGCCTAT
GAGGTGCTGG TGCGCAAATA CCAGGGCCGC GTTGCGTCGG TGATCTCTCG TACGGTTTCT
GACCCGGTGC GGGTGCAGGA CCTTACCCAA GAAGCCTTTC TTAAAGCCTA TCGAGCGTTA
CATCACTTTC GTGGAGATGC CGCCTTTTAT ACGTGGTTGT ACCGCATTGC CGTCAACACG
GCGAAAAATT TTGTCATGTC CCAGGATCGC GGTATTCCCA TGAGCGATAT GGATCTAGAG
GATGCTGATC GCCTTTCGCC TCAATTGCGT GACTATGATA CCCCAGAAAA TCAGGTGCTG
CGTGGCGAGT TAATGGATGC CCTAAAGGTT GCCATTGAAG AGCTGGCCCC CACCATGAAA
CAGGCCATCG CCCTGCGGGA TCTGGAGGGT AAATCTTATG AAGAGATTGC CGAGATCATG
GGTTGCCCCA TTGGCACGGT GCGTTCGCGT ATTTTCCGTG GGCGGCAAGA GATTGTTAAT
AAATTGAAAG ATCATCTTCC CAACGGCAAC TTGGCCGGTC ATCACGGGCT GTAA
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| Protein sequence | MNEADEILVE KTKQGDKKAY EVLVRKYQGR VASVISRTVS DPVRVQDLTQ EAFLKAYRAL
HHFRGDAAFY TWLYRIAVNT AKNFVMSQDR GIPMSDMDLE DADRLSPQLR DYDTPENQVL
RGELMDALKV AIEELAPTMK QAIALRDLEG KSYEEIAEIM GCPIGTVRSR IFRGRQEIVN
KLKDHLPNGN LAGHHGL
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