| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1770 |
|---|
| Symbol | |
|---|
| ID | 4482596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 2188244 |
|---|
| End bp | 2189863 |
|---|
| Gene Length | 1620 bp |
|---|
| Protein Length | 539 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639722512 |
|---|
| Product | L-aspartate oxidase |
|---|
| Protein accession | YP_865684 |
|---|
| Protein GI | 117925067 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0029] Aspartate oxidase |
|---|
| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00592251 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000779121 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAGCG CTCAACATCG CCGTTTTGTC AGCGATTTTC TGATTCTAGG CGGTGGTTCC
ACTGGTCTGG ATCTGGCTCT CAGGTTGGCC GAACATGGCA AGGTGCTGGT GCTTACCAAA
GCCCCCATTG GCGACTGTAA CAGCATGATG GCCCAAGGCG GCATCGCTGC GGTGCTGGAT
GAGGACGACA GCACCATCCT ACACTACGAA GATACCATGA CCGCCGGTGC GGGCCTGTGC
AACCCCCAAT CGGTGCGCTT GGTGGTGGAA AATGGCGCCC GTATGATCCA GCATCTTATT
GATCTGGGCA CCCCCTTTGA CAAAACCGAT AACAACAGCT ACCACCTAAC CCGCGAGGGT
GGCCATAGCC GGCGCCGCGT GATCCATGCG GCAGATGCCA CCGGTCGTGC GGTGATGCTT
AGCCTGATTA AACAGGCACA AGCCCACCCC AACATTGAAG TTTTGCCCAA CCAGATCGCC
ATTGATCTCA TTACCGCCCA CAAACTGGGC CATTTTCTAC CGGGCAAAAA AGATCGCTGT
TATGGCTGTT ATGCGCTGGA TACCGAAGCC GATGTGATCC GCACCTACCA AGCCCGCTTT
ACCATTTTAG CCAGTGGCGG GGCGGGCAAG GTCTATCTTT ACACCTCCAA CCCCGACACA
GCCACTGGGG ATGGCATTGC CATGGCCTAT CGTGCTGGCT GCCGGGTCTC TAACATGGAG
TTTATTCAGT TCCACCCCAC CTGCCTTTAC CACCCACAAG CCAAATCTTT CTTGGTTTCC
GAAGCGGTAC GTGGCGAAGG GGGGCATCTT TTGTTGGCCG ATGGAACCCG CTTTATGGAG
CGCCACCACC CTCTGCTGGA GTTGGCCCCA CGGGATATTG TGGCCCGCGC CATTGACTAC
GAAATGAAAC GCACCGGCGA GCCCTGCGTG CATCTGGATA TCAGCCATAA GGGTGCTGAT
TTTATTAAGG CACACTTCCC CACCATCTAT GAAAAATGCC TTGAATTTGG CATCGACATG
ACCCAAGAGC CCATCCCCGT GGTACCGGCT GCCCACTATA CCTGCGGCGG GGTTGTTACC
GGTTTGCAAG GTGCAACGGA TATTGAGTCT CTGTATGCCA TTGGTGAGGT AGCCAGCACC
GGCCTGCACG GAGCCAACCG CTTAGCCAGC AACAGTTTGC TGGAGTGCTT GGTCTTTTCG
GAATCTGCCT ATAACGACAT TGTCAGCAAA ATGTTTGGGG AAGATCGCCC CGTGCTCTCC
CGCCTTCCCT TGTGGGATAG TTATGAAGCA GGCAGTTGCG AAGAAGAGAT CTTAATCGCC
CACGATTGGC AGGAGATCCG GCGTTTTATG TGGGATTATG TAGGCATTGT GCGCAGCAAC
CAGCGCCTAG CCCGCGCCCG CCGACGCATT GAAATGGTGA TGCAGGAGAT CAATGAGTAT
TACTGGAACT GCAAGGTCAG CCAAAACCTG ATTGAACTGC GCAATCTGGC CTTGGTGGCC
CATTTGATTA TTCGTAGCTC CCAGCACCGC AAGGAGAGCC GTGGCCTCCA CTACACCACC
GACTACCCCG AGCGGGATGA TGCCCGCTGG CTCAAAGAGA CCGTGCTGCC CATTGAGTAG
|
|---|
| Protein sequence | MVSAQHRRFV SDFLILGGGS TGLDLALRLA EHGKVLVLTK APIGDCNSMM AQGGIAAVLD
EDDSTILHYE DTMTAGAGLC NPQSVRLVVE NGARMIQHLI DLGTPFDKTD NNSYHLTREG
GHSRRRVIHA ADATGRAVML SLIKQAQAHP NIEVLPNQIA IDLITAHKLG HFLPGKKDRC
YGCYALDTEA DVIRTYQARF TILASGGAGK VYLYTSNPDT ATGDGIAMAY RAGCRVSNME
FIQFHPTCLY HPQAKSFLVS EAVRGEGGHL LLADGTRFME RHHPLLELAP RDIVARAIDY
EMKRTGEPCV HLDISHKGAD FIKAHFPTIY EKCLEFGIDM TQEPIPVVPA AHYTCGGVVT
GLQGATDIES LYAIGEVAST GLHGANRLAS NSLLECLVFS ESAYNDIVSK MFGEDRPVLS
RLPLWDSYEA GSCEEEILIA HDWQEIRRFM WDYVGIVRSN QRLARARRRI EMVMQEINEY
YWNCKVSQNL IELRNLALVA HLIIRSSQHR KESRGLHYTT DYPERDDARW LKETVLPIE
|
|---|
| |