| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1760 |
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| Symbol | |
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| ID | 4482586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2177072 |
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| End bp | 2179381 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639722502 |
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| Product | ATP-dependent Clp protease ATP-binding subunit ClpA |
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| Protein accession | YP_865674 |
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| Protein GI | 117925057 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0476862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.109361 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAGCA AACATCTGGA AACCTCCCTA AACAAAGCGT TGCAGTTGGC CCACGCACGG
CGCCATCAAT TTGCTACGCT GGAACATCTT CTACTTGCTC TGCTGGATAA TCCTGAAGTG
GTGGATATTT TAATCCCCTG CGGCTGTGAT ATGCAGCAGT TAAACATGGA ACTTGCGGAA
CATTTGGAGC AGCATATTCC CCTGTCGGCT GACGCGGCGC CATCCATTGC TGACATTACG
CCCACCATCG CTTTTCAGCG GGTTATTCAA CGGGCTGTGC AGCAAGTGCA ATCCTCTGGC
CGCGACATGG TGACGGGGGC CTATGTGCTG GTAGCCATGT TTAATGAAAA AGATGCCCAT
GCGGTCTACT TTTTAGCCAA ACAGAACATC AATAAGCTGG ATGTACAATC CATGATCGCC
CACGGTGGCG AGAGCGAGGC GACAGGCGCA GGCGAGCATG GCCACGCCCA CGAGGGTAGT
GCGGCCGGGG CAGGCAACAA GGAGAAGGAT GACCCCTTGG CCGCTTATAC GGTCAACCTA
AATATCCGCG CGCAAGAGGG TAAAATTGAC CCCCTGATCG GGCGGGAAAA TGAGATCCGC
CGCACCCTGC AAATCCTCTG TCGGCGCCGC AAAAACAATC CCCTGTATGT GGGGGATGCA
GGCGTGGGTA AAACCCACTT GGCCGAGGGT TTGGCGCTCA AAATTGTCAA TGGTGAGGTA
CCTGAAATCC TGGCCGATGC CGAGGTGTTT TCGCTGGATA TGGGCAGTCT ACTGGCGGGC
ACCAAATACC GGGGTGATTT TGAATCCCGC CTTAAAAATG TACTACGCGC CTTAAAAGAG
CGCCCCAAGT CGGTACTGTT TATTGATGAG ATCCATACGG TGATTGGAGC CGGTGCCACC
AGTGGCAGCA CCATGGATGC CTCCAATCTG CTCAAGCCTA TGCTGCAAAA TGGCGAGCTT
CGCTGTATTG GCTCCACCAC CTTTGAGGAG TACCGCACCA TCTTTGAACA GGATCGTGCT
TTGGCCCGAC GTTTTCAAAA GGTGGATGTG CTTGAGCCTT CACTTGAAGA AACCATTAAA
ATTCTCAAAG GTTTAAAGAT ACGTTTTGAG GATCACCATG GTGTGCGTTT TACCAATCAG
GCCCTGCAAA CCGCTGCGGA GTTATCGGCC CGCCATATTA ATGACCGCAA ACACCCTGAT
TCGGCCATTG ATGTGATTGA TGAAGCGGGG GCAGCTAGTC AGTTATTGCC CCTCTCCAAA
CGCAAAAAAT CCATTGGCGT TAAGGAGATT GAACAGGTAG TGGCCTTGAT GGCCCGCATT
CCCACCCGCT CGGTGAGCAA GGATGACCGT CAGGTATTGC GCAATTTGGA CAAAAATTTG
CGCCTCTCCC TGTTTGGTCA AGATGGGGCT ATTGATAAAA CCTGCGAGGC CATTAAGCTC
AATCGCTCTG GCTTGGGAAA TCCAGAAAAA CCCATTGGCA GCTTTTTGTT TGCGGGTCCC
ACGGGGGTTG GTAAAACAGA GCTGGCCCGG CTGCTTGCCG CCGAGATGGG GGTTGAGCTG
ATCCGCTTTG ACATGTCTGA GTATATGGAG CGTCATGCGG TATCGCGCCT CATTGGAGCC
CCCCCAGGTT ATGTGGGTTT TGAGCAGGGT GGACTGCTAA CCGATGCGGT GACGAAAAAT
CCCCATTCGG TGCTGCTGCT GGATGAGATT GAGAAGGCCC ATCCCGATGT CTTTAATATT
CTGCTTCAGG TAATGGACCA CGGCAAGCTG ACGGACAACA ATGGCCGTCA GGCAGATTTT
CGCAATGTGG TGCTGATTAT GACCACCAAT GCGGGGGCTT CGGATCTGGA GCGGGCCTCG
GTGGGGTTTG TTACCCAGAC CCATGTTGGG GATGATATGA AGGCGATTAA CCAAACTTTC
GCCCCAGAGT TCCGCAACCG ACTGGATGCC ATTATTCCGT TTGTGCAACT CAATCGGGAG
ACCATTTTGC GGGTGGTGGA TAAGTTTTTG GTCCGTTTGG AAACCCAGTT GGAAGAGAAG
GGGGTTGCCC TGTTTGTGGA TGATTCGGCG CGTCATCTGT TGGCGAAAAA GGGCTACGAT
AAAAAACATG GTGCCCGTCC CATGGAGCGC GCCATTCAGC AGGAGCTCAG AAAGCCCCTC
TCCGATGAGC TGCTGTTTGG CAAGTTGGTG CATGGTGGTG CGGTGCATGT ATCGGCGGTT
GAGGCGGCCA ATGAGCTGGC CATTTTGGTG GAGGACAGCC ACGAGGTGGA AAAAGCCGAA
AAAACCAGCG AAGAGACCAG CGAAGCTTAA
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| Protein sequence | MISKHLETSL NKALQLAHAR RHQFATLEHL LLALLDNPEV VDILIPCGCD MQQLNMELAE
HLEQHIPLSA DAAPSIADIT PTIAFQRVIQ RAVQQVQSSG RDMVTGAYVL VAMFNEKDAH
AVYFLAKQNI NKLDVQSMIA HGGESEATGA GEHGHAHEGS AAGAGNKEKD DPLAAYTVNL
NIRAQEGKID PLIGRENEIR RTLQILCRRR KNNPLYVGDA GVGKTHLAEG LALKIVNGEV
PEILADAEVF SLDMGSLLAG TKYRGDFESR LKNVLRALKE RPKSVLFIDE IHTVIGAGAT
SGSTMDASNL LKPMLQNGEL RCIGSTTFEE YRTIFEQDRA LARRFQKVDV LEPSLEETIK
ILKGLKIRFE DHHGVRFTNQ ALQTAAELSA RHINDRKHPD SAIDVIDEAG AASQLLPLSK
RKKSIGVKEI EQVVALMARI PTRSVSKDDR QVLRNLDKNL RLSLFGQDGA IDKTCEAIKL
NRSGLGNPEK PIGSFLFAGP TGVGKTELAR LLAAEMGVEL IRFDMSEYME RHAVSRLIGA
PPGYVGFEQG GLLTDAVTKN PHSVLLLDEI EKAHPDVFNI LLQVMDHGKL TDNNGRQADF
RNVVLIMTTN AGASDLERAS VGFVTQTHVG DDMKAINQTF APEFRNRLDA IIPFVQLNRE
TILRVVDKFL VRLETQLEEK GVALFVDDSA RHLLAKKGYD KKHGARPMER AIQQELRKPL
SDELLFGKLV HGGAVHVSAV EAANELAILV EDSHEVEKAE KTSEETSEA
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