Gene Mmc1_1759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1759 
Symbol 
ID4482075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2175069 
End bp2176967 
Gene Length1899 bp 
Protein Length632 aa 
Translation table11 
GC content54% 
IMG OID639722501 
Producttransposase, IS4 family protein 
Protein accessionYP_865673 
Protein GI117925056 
COG category[L] Replication, recombination and repair 
COG ID[COG5421] Transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.518431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0966582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTGTA GTGCCATAAT AAATTATTAT GTCTTGCGCC ACCATGGTGC TTTTGGTATC 
ATTCCGAGTA TGTATATACG ACGCACACAA ACCCGCAATA CAGCCACAGG CGAATCTTAC
TACACGCATC GCCTGGTTCA ATCCCTTCGT GTCGGCACGA AGGTCAGGCA GGTGACACTC
TTGAATCTTG GCCGTCATTT CGCCATAGGC CAGAATCACT GGCCCACCTT GTGTTCACGT
ATCGATCAAC TGCTAAGCCC TCAGAAGACA CTGATTTCTC TTGATTGTCC TTCGCAAGTG
GAGCGGGAGG CCCAGCGTAT TGTCGCGCAA TTGTTGACCC GTCAGCCGGA AGCAATCCCG
TCTGCCAAGG AGACGGAAAC CGGCCTTTCC CCAGAGGATG TGCAAACAGT ATTGGTGGAC
TCTCTTGAAA TGAGCCGCCC CCGGAGTGTG GGGGTGGAGC AGGTGGGACT ATGGGCCATG
GGTAAGGCAG GGTTTACAGA ACTGTTGGCC GATGTCGGAC TAACCGGCCC TCAGCGAGCC
GCAGCCATCG GCGCCATTAT TGGACGCATG GCCGCACCTG GTTCCGAACG GGCGCTGCAT
AGATGGCTCA GCGCCCAAAG CGGCCTAGGG GAGTTGCTTG ATGTGGACTT CGAGACCATG
AGCCTGATGC AATTTTACCG AGTTTCAGAC CTATTGATCA GAAACCGCGA GGCTATCGAA
AACAGATTGT TTTCCAAGAT TAACGATCTA TTCAACCTGC CGGGCACCGT CACCTTATAC
GATTTGACCA ATACCTATTT TGAGGGAGAG GCAGAAGGAA ACAGCAAAGC TCAGCGGGGG
CGCTCAAAGG AGAAGCGTTG CGACTCTCCC CTGTTGACCT TGGGTCTGGT ACTCGACGGT
AGCGGGTTTG TGCGCCGTTC GCAGATTTTC CCCGGCAATG TCTCCGAAGG GAGCACCCTG
GAAGGGATGC TCAAAGGCTT GAATGCTCCC AATGGTGCCT TGGTGGTTAT GGATCGGGGG
GTAGCCACTG AGGCCAATCT TGTCTGGTTA CGCGACAAAG GCTATCGTTA TCTGGTGGTC
AGCCGAGAAC GCGAGCGGCA ATTCGATTTC AACGGTGCTG CATGTATCGA AACGGCCGCA
AAGGAACAGA TCCACATCCA AAAAGTTCTC AGCGACGATG GCCAGGAGGT GAGGCTTTAC
TGTCATTCCC AACGCCGTGC GGAAAAGGAA AAGGGGATCT CCCGGCGTTT TGCCGAGCGC
TTTGAAGCCG GTCTGACTAA GCTCTCCGAG GGGCTTTCCA AGCCCCGCAC CACAAAGAAT
ATCGATAAAC TTTGGGAGCG CATTGGACGG CTGAAAGAAA AAAATCGTGG TATAGGCCAG
CACTACCACA TCGAAATCAT CCCGGACGAC AGTGGTTTGC AGGCCCAAGC CATCCATTGG
AAACAAAAAC CGCTCGATGG CACCTCGCTG ACCCACCCTG GGGTCTACTG CCTGCGTAGC
AACGAGACCG GCTGGGATGA GGAGCGCTTA TGGCGCACCT ACATCACCCT CACGGATCTG
GAATCGGTGT TTCGCTCTCT CAAATCGGAA TTGGGCTTGC GTCCACTCTT CCATCGGAAA
GAGGAACGCA GCGATGGTCA TCTGTTTATC ACCGTGCTGA CCTACCAGAT CGTACAGATA
ATACGTCAAC AATTGGCGGA AAAAGGTATC CACGGTCGCT GGAGCACGCT GCGAGACATC
CTCTCCAGCC AGTGCCGGAT TACCGCTTCA TTTCGACGAC CCGATGGACA TTCCTTGCAG
GTGCGCAAAG CCACCAGACC TGAGCCTGAA CAACAGAAAA TCTTCCAGGC GCTTGGAATC
CATGCAAACC CAGGCGGGGT GAAAAAGATG GTCGTCTGA
 
Protein sequence
MFCSAIINYY VLRHHGAFGI IPSMYIRRTQ TRNTATGESY YTHRLVQSLR VGTKVRQVTL 
LNLGRHFAIG QNHWPTLCSR IDQLLSPQKT LISLDCPSQV EREAQRIVAQ LLTRQPEAIP
SAKETETGLS PEDVQTVLVD SLEMSRPRSV GVEQVGLWAM GKAGFTELLA DVGLTGPQRA
AAIGAIIGRM AAPGSERALH RWLSAQSGLG ELLDVDFETM SLMQFYRVSD LLIRNREAIE
NRLFSKINDL FNLPGTVTLY DLTNTYFEGE AEGNSKAQRG RSKEKRCDSP LLTLGLVLDG
SGFVRRSQIF PGNVSEGSTL EGMLKGLNAP NGALVVMDRG VATEANLVWL RDKGYRYLVV
SRERERQFDF NGAACIETAA KEQIHIQKVL SDDGQEVRLY CHSQRRAEKE KGISRRFAER
FEAGLTKLSE GLSKPRTTKN IDKLWERIGR LKEKNRGIGQ HYHIEIIPDD SGLQAQAIHW
KQKPLDGTSL THPGVYCLRS NETGWDEERL WRTYITLTDL ESVFRSLKSE LGLRPLFHRK
EERSDGHLFI TVLTYQIVQI IRQQLAEKGI HGRWSTLRDI LSSQCRITAS FRRPDGHSLQ
VRKATRPEPE QQKIFQALGI HANPGGVKKM VV