Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1738 |
Symbol | |
ID | 4482125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 2148338 |
End bp | 2150155 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639722480 |
Product | DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit |
Protein accession | YP_865652 |
Protein GI | 117925035 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0751015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0509359 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGTCA TGTCTTCCTA CGTCGTATTG GCGCGTAAAT GGCGGCCACG CCGCTTTGAA GATCTGATTG GTCAGGAACA TACGGTCCAG GCGCTGCGTC ATGCACTGGA GCAGGGCCGT ATACCCCACG CTTTTCTCTT TACCGGCATT CGTGGCATCG GCAAAACCAC CCTCTCTCGA TTATTGGCGA TGTGCTTAAA CTGCGGTACT GGGGTGACGG CCAATCCCTG TGGCGCGTGT GATAGCTGTC GCGCCATTGT GCGGGGCGAG CACCCTGATG TATTTGAGGT GGATGCCGCC TCCCGCACCA AAGTCGAGCA GATGCGGGAG CTTTTGGATG GTGTCGCTTA CACCCCCTCG CTAAGCCGCT ATAAGATCTA TATTCTTGAT GAAGTCCATA TGCTCAGTGC CTCATCCTTC AATGCGTTGC TCAAAACGTT GGAGGAGCCC CCCACGCATG TTAAGTTCAT TTTTGCAACC ACCGAAGTGC GGAAAATCCT GCCGACCATT CTCAGCCGTT GCCAGCGCTA TGATCTGCGC CGTCTGGATC GTGACGGGCT TGCCCGCTAT CTTGCGCATG TGTTGGATGT TGAGCAGATT GCCTATGACC AAGAGGGGCT TGCTGCCATA AGTCACGCGG CCGATGGTTC GGTGCGGGAT GCGCTTTCGC TGCTGGATCA AGCCATTGCC CATGGTGGCG GGCGGGTGGA TTATACCCAT GTGAGCGGTT TATTGGGGTT GACCGACCGG CAAGCGGTGG TGGCGCTGTT TGCGGACCTC TGCCGTGGGC GGTTACTGGA GATGTTGGAG CGCGCGGCCT ATTTCCATCG TGATGGGGTA GAGCCGGTGG TGCTATTGAA CGATTTGCTG GATATAACCC ACCAAGTGAC CCGTGAGTTG GCGGTGGGGG TCGGGGATGC TGCCCAGGCG CTTTCTGAGC ACGAGGGGTT AAAAGAGGTG TGGCCTAAGC TTGGTCTTGA GCATTTGCAG ATGCTCTACC AGGTATTGCT GCGTGGGCGT GAGGATCTGC AAATGGCTCG ATTACCCCGG CAGGCGTTGG AGATGTTGTT GCTGCGGGCG GCGCATTTGC GGCCCGTGCC GCCCTTAAAA CAGTTGGTGG AGTCATTGCA GCGGCAAGCA GGGGTGGAGC CCGGTGAAAG GCAGGCGTCG CCAGCGGTAA AAAAGTTTGA TGCCCCGGGG GTGGGGCAGA GTGAGGTTGC CCCCACGGTA CACTTTGCGC CTAAGAGTGC CGCTTTAGAG GCGCCGCAAG CGGTCCAAGC GCCCCAGGTT AAGCGAGCAA AAAAGCAACC CACGGTTCTG GCGCCGGAGC CGCAGCCCCC TGTAGTGCCG CCCGATTGGC CCGCCGTGCC GCCTTTGCAG GAAGAGCCTA CGGTCGTTTC CCCAACGCCA CCGGCTACGG TGGAGAGCTG GGAAAAGCTG ATTGAGGCGG CGCGCATTAA GTTTCCGTTG CTGGCACAAA AGATGGAGAG TCATCTTAGT TTGCTGAGTT ATACAGGGGG GTCAGGCCCC CACGATCCAC CTTGCATGGA GGTGATGATT GCTCACGCTT TTGCCGGCGA ACCCAGTAAG GTGCATAAAA ACCTTATGGA TTTGTTGGTT TCGTTAAAAC TGCCCAATGG GGTGGTGCAT ATCCGTAAAA GCAGCGATGG AACGCGCCCG GATACAGAAG CGGAAAAACA AAAGAAAGCT CAAGACGCTT ACCAAAATGC CTTGACGCGT GAGGTGGCGG ACGATCCGTT AATTCAAGAG ATTGAGCGGC GGTTTGAAGC AAAGATTATC CATGTTGAAC CGGTTTGA
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Protein sequence | MGVMSSYVVL ARKWRPRRFE DLIGQEHTVQ ALRHALEQGR IPHAFLFTGI RGIGKTTLSR LLAMCLNCGT GVTANPCGAC DSCRAIVRGE HPDVFEVDAA SRTKVEQMRE LLDGVAYTPS LSRYKIYILD EVHMLSASSF NALLKTLEEP PTHVKFIFAT TEVRKILPTI LSRCQRYDLR RLDRDGLARY LAHVLDVEQI AYDQEGLAAI SHAADGSVRD ALSLLDQAIA HGGGRVDYTH VSGLLGLTDR QAVVALFADL CRGRLLEMLE RAAYFHRDGV EPVVLLNDLL DITHQVTREL AVGVGDAAQA LSEHEGLKEV WPKLGLEHLQ MLYQVLLRGR EDLQMARLPR QALEMLLLRA AHLRPVPPLK QLVESLQRQA GVEPGERQAS PAVKKFDAPG VGQSEVAPTV HFAPKSAALE APQAVQAPQV KRAKKQPTVL APEPQPPVVP PDWPAVPPLQ EEPTVVSPTP PATVESWEKL IEAARIKFPL LAQKMESHLS LLSYTGGSGP HDPPCMEVMI AHAFAGEPSK VHKNLMDLLV SLKLPNGVVH IRKSSDGTRP DTEAEKQKKA QDAYQNALTR EVADDPLIQE IERRFEAKII HVEPV
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