Gene Mmc1_1738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1738 
Symbol 
ID4482125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2148338 
End bp2150155 
Gene Length1818 bp 
Protein Length605 aa 
Translation table11 
GC content57% 
IMG OID639722480 
ProductDNA polymerase III, gamma subunit / DNA polymerase III, tau subunit 
Protein accessionYP_865652 
Protein GI117925035 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0751015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0509359 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGTCA TGTCTTCCTA CGTCGTATTG GCGCGTAAAT GGCGGCCACG CCGCTTTGAA 
GATCTGATTG GTCAGGAACA TACGGTCCAG GCGCTGCGTC ATGCACTGGA GCAGGGCCGT
ATACCCCACG CTTTTCTCTT TACCGGCATT CGTGGCATCG GCAAAACCAC CCTCTCTCGA
TTATTGGCGA TGTGCTTAAA CTGCGGTACT GGGGTGACGG CCAATCCCTG TGGCGCGTGT
GATAGCTGTC GCGCCATTGT GCGGGGCGAG CACCCTGATG TATTTGAGGT GGATGCCGCC
TCCCGCACCA AAGTCGAGCA GATGCGGGAG CTTTTGGATG GTGTCGCTTA CACCCCCTCG
CTAAGCCGCT ATAAGATCTA TATTCTTGAT GAAGTCCATA TGCTCAGTGC CTCATCCTTC
AATGCGTTGC TCAAAACGTT GGAGGAGCCC CCCACGCATG TTAAGTTCAT TTTTGCAACC
ACCGAAGTGC GGAAAATCCT GCCGACCATT CTCAGCCGTT GCCAGCGCTA TGATCTGCGC
CGTCTGGATC GTGACGGGCT TGCCCGCTAT CTTGCGCATG TGTTGGATGT TGAGCAGATT
GCCTATGACC AAGAGGGGCT TGCTGCCATA AGTCACGCGG CCGATGGTTC GGTGCGGGAT
GCGCTTTCGC TGCTGGATCA AGCCATTGCC CATGGTGGCG GGCGGGTGGA TTATACCCAT
GTGAGCGGTT TATTGGGGTT GACCGACCGG CAAGCGGTGG TGGCGCTGTT TGCGGACCTC
TGCCGTGGGC GGTTACTGGA GATGTTGGAG CGCGCGGCCT ATTTCCATCG TGATGGGGTA
GAGCCGGTGG TGCTATTGAA CGATTTGCTG GATATAACCC ACCAAGTGAC CCGTGAGTTG
GCGGTGGGGG TCGGGGATGC TGCCCAGGCG CTTTCTGAGC ACGAGGGGTT AAAAGAGGTG
TGGCCTAAGC TTGGTCTTGA GCATTTGCAG ATGCTCTACC AGGTATTGCT GCGTGGGCGT
GAGGATCTGC AAATGGCTCG ATTACCCCGG CAGGCGTTGG AGATGTTGTT GCTGCGGGCG
GCGCATTTGC GGCCCGTGCC GCCCTTAAAA CAGTTGGTGG AGTCATTGCA GCGGCAAGCA
GGGGTGGAGC CCGGTGAAAG GCAGGCGTCG CCAGCGGTAA AAAAGTTTGA TGCCCCGGGG
GTGGGGCAGA GTGAGGTTGC CCCCACGGTA CACTTTGCGC CTAAGAGTGC CGCTTTAGAG
GCGCCGCAAG CGGTCCAAGC GCCCCAGGTT AAGCGAGCAA AAAAGCAACC CACGGTTCTG
GCGCCGGAGC CGCAGCCCCC TGTAGTGCCG CCCGATTGGC CCGCCGTGCC GCCTTTGCAG
GAAGAGCCTA CGGTCGTTTC CCCAACGCCA CCGGCTACGG TGGAGAGCTG GGAAAAGCTG
ATTGAGGCGG CGCGCATTAA GTTTCCGTTG CTGGCACAAA AGATGGAGAG TCATCTTAGT
TTGCTGAGTT ATACAGGGGG GTCAGGCCCC CACGATCCAC CTTGCATGGA GGTGATGATT
GCTCACGCTT TTGCCGGCGA ACCCAGTAAG GTGCATAAAA ACCTTATGGA TTTGTTGGTT
TCGTTAAAAC TGCCCAATGG GGTGGTGCAT ATCCGTAAAA GCAGCGATGG AACGCGCCCG
GATACAGAAG CGGAAAAACA AAAGAAAGCT CAAGACGCTT ACCAAAATGC CTTGACGCGT
GAGGTGGCGG ACGATCCGTT AATTCAAGAG ATTGAGCGGC GGTTTGAAGC AAAGATTATC
CATGTTGAAC CGGTTTGA
 
Protein sequence
MGVMSSYVVL ARKWRPRRFE DLIGQEHTVQ ALRHALEQGR IPHAFLFTGI RGIGKTTLSR 
LLAMCLNCGT GVTANPCGAC DSCRAIVRGE HPDVFEVDAA SRTKVEQMRE LLDGVAYTPS
LSRYKIYILD EVHMLSASSF NALLKTLEEP PTHVKFIFAT TEVRKILPTI LSRCQRYDLR
RLDRDGLARY LAHVLDVEQI AYDQEGLAAI SHAADGSVRD ALSLLDQAIA HGGGRVDYTH
VSGLLGLTDR QAVVALFADL CRGRLLEMLE RAAYFHRDGV EPVVLLNDLL DITHQVTREL
AVGVGDAAQA LSEHEGLKEV WPKLGLEHLQ MLYQVLLRGR EDLQMARLPR QALEMLLLRA
AHLRPVPPLK QLVESLQRQA GVEPGERQAS PAVKKFDAPG VGQSEVAPTV HFAPKSAALE
APQAVQAPQV KRAKKQPTVL APEPQPPVVP PDWPAVPPLQ EEPTVVSPTP PATVESWEKL
IEAARIKFPL LAQKMESHLS LLSYTGGSGP HDPPCMEVMI AHAFAGEPSK VHKNLMDLLV
SLKLPNGVVH IRKSSDGTRP DTEAEKQKKA QDAYQNALTR EVADDPLIQE IERRFEAKII
HVEPV