Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1734 |
Symbol | |
ID | 4482120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2141839 |
End bp | 2143584 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639722476 |
Product | sulphate transporter |
Protein accession | YP_865648 |
Protein GI | 117925031 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor [TIGR00815] high affinity sulphate transporter 1 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.181286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0512367 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACCA CCAAACGCGC TTTTTCAGCG CAGATAGAGC CGACCTTTTC TGAACTTTTC ACCCCAAAAT TGTTCACCAC CTTGCGCGAG GGTTACAGCC TCGCTGATTT ACGGGCCGAT GCCTTGGCGG GCTTGACCGT TGCGATTGTG GCGCTGCCTT TATCGATGGC GATTGCCATT GCATCGGGGG CTTCGCCTGC TCAGGGCCTC TATACGGCCA TCGTGGGGGG GTTTTTAGTA TCGGCGTTGG GGGGCAGCCG CTTTCAAATT GGCGGGCCTG CTGGGGCCTT TATTGTGTTG GTTGCCGCAA CGGTGCAAGC TCATGGTATG GATGGTTTAA TTTTAGCAAC CTTGCTGTCG GGTCTCATCT TAGCGATTCT TGGTTTTTTC CGGCTGGGGA CCTACATTAA ATTTATCCCT TATCCCGTTA CCGTGGGTTT TACCGCCGGC ATTGCAGCCA TTATCTTTGC TAGCCAAATT AAGGAGTTGC TTGGCCTTAC ACTAACCACC AGCGAACCAG GACCCTTGTT AGAAAAGCTA CCGGTATTAT GGACCAGCCT ACCCAGCTAT GACTCAGCAA CCGTTACACT CGCCGTGGCA ACGATAGGCT CGATCCTTAT CCTCAAGCAC TACCGTCCCC ATTGGCCGGG CATGTTACTG GCCGTGGTAG CCGCCTCTTT GGTCACCCTC TTGCTGGATC TGCCAATCGC CACCATCGGT TCAAAATTTG GGGGAATTCC CAGCAGTTTA CCAACCCCTG TTTTACCCGA ATTCACCCTT GCCAAACTAC AGGATGTGCT GCCCAGTGCG CTCTCTTTTG CCCTGCTGGG TTCCATTGAG TCCTTATTGT CCGCCGTGGT GGCGGATGGC ATGACCGGTC GGCGCCATCG TTCTAATTGC GAATTGGTGG CCCAAGGTGT CGCCAATATG GCTTCGGCCC TGTTTGGTGG CATCTGCGTC ACGGGGACCA TTGCCCGTAC CGCAACCAAT GTGCGCGCAG GGGCCCACGG CCCCTTTGCC GGGATGTTGC ACGCCCTATT CTTGCTTGCT TTTATCTTAA TCGCCGCCCC ACTGGCCCGT TATATACCCT TGGCAAGCTT GGCGGGCGTA TTGGCCGTGG TGGCTTGGAA TATGGTCGAA AAACATGCTT TTGCAACCTT GATTTGGGCT TCAAGGGGTG ACGCTGCGGT TCTTTTGACA ACCTTTTTAT TGACCCTTTT CCGGGATTTA ACCGAGGCCA TCGTGGTGGG CTTTGCCCTT GGTTCGGTCC TGTTTATCCA TCGCATGTCA AAAACCACAG CAATCGAGAC GCAAACCCCG TTTGTGGCAG AGGACAGAGC CGACAACATC GGCAACCGTG CGCCCTATGA TCAAGCTCGC ATCAATGACC CGGATGTGGT GATTTATCGT ATTTCTGGGG TCTTTTTCTT TGGCGCGGCG GCCTCTATTG GCTCCGTCTT AGATCGAATT GCCGATACCC ACCGAGCCTT GATTATTGAT TTCTCATCGG TACCCTTTTT GGATTCCACG GCGGCCAACA CCATAGAAGG TTTGGCCCAT AAAGCCAAAC GGCGTAATGT TAAGGTATGT TTAATCGGTA CAACCCATGA ACTCAGGCGG GATCTGTTTG CGCTGGGCAT TAAACCGCCC ATGGTTCACT ATGCTCGGGA ATTAAGCTGT GCCCTTAGGG TATTGAAAGC CAAAAAAACA GAACCAACAG AGGTGGTTTC AACCCCGCTT GATTGA
|
Protein sequence | MTTTKRAFSA QIEPTFSELF TPKLFTTLRE GYSLADLRAD ALAGLTVAIV ALPLSMAIAI ASGASPAQGL YTAIVGGFLV SALGGSRFQI GGPAGAFIVL VAATVQAHGM DGLILATLLS GLILAILGFF RLGTYIKFIP YPVTVGFTAG IAAIIFASQI KELLGLTLTT SEPGPLLEKL PVLWTSLPSY DSATVTLAVA TIGSILILKH YRPHWPGMLL AVVAASLVTL LLDLPIATIG SKFGGIPSSL PTPVLPEFTL AKLQDVLPSA LSFALLGSIE SLLSAVVADG MTGRRHRSNC ELVAQGVANM ASALFGGICV TGTIARTATN VRAGAHGPFA GMLHALFLLA FILIAAPLAR YIPLASLAGV LAVVAWNMVE KHAFATLIWA SRGDAAVLLT TFLLTLFRDL TEAIVVGFAL GSVLFIHRMS KTTAIETQTP FVAEDRADNI GNRAPYDQAR INDPDVVIYR ISGVFFFGAA ASIGSVLDRI ADTHRALIID FSSVPFLDST AANTIEGLAH KAKRRNVKVC LIGTTHELRR DLFALGIKPP MVHYARELSC ALRVLKAKKT EPTEVVSTPL D
|
| |