Gene Mmc1_1724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1724 
Symbol 
ID4481312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2127257 
End bp2128375 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content58% 
IMG OID639722466 
Producthypothetical protein 
Protein accessionYP_865638 
Protein GI117925021 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.254859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATC AACCATTGAC ACAACTGCCT GCTCTGTTGG ATGTGCAGGA GAGTGATCTG 
CTTTATGCGG TGCGGGATGG GCAGTCCAAG CAGCTTGACG TGGCAACATT AAGGGGCATG
AACGAGGGTC TCTATGCTCC AGTTAGCCAC GGGCATAGCC TGTCTGACAT CACTGACGCG
GGGCAGGCCG CCGCCTTAGC GGTAGGCACT ACCCCTGGCA CGGTGGCGGC GGGGGATCAT
AACCATAGCG GCCTCTATCA ACCCCACTTC ACCAGCAGCT ACACCCTGCC CAGCGCCGAT
GGCAGCAGTG GGCAGGTGCC GCAAACCAAC GGGGCCGGTG TCGTAAGCTG GGTGGATATG
GCGGCAGGGG GTGGGGGCGC TACGGCACTG AATGAGCTAA GCGATGTGGC CTATCTGGCC
GGGGCCTCGG GTTATGTGAT CATGGATGAT GGGGTAGAAA CCCCTCAGCC CGGGCAAATA
GCGATTGGTG ATCTGAACGG GGCGAGCTAT GCGGGTGCGA TCTCGATTGG CATGAACGTC
ACCACCACCG GCCTTAATGC GGTGGTCATT GGCGCAGGGG CATCGGGTGG CGTTCAAGAT
GTGGCGCTTG GTTATGGTGC AACGGCTACT GGTTATGGCG TAGCGGTTGG CACGAACGCC
AAGGCAAAGT CGGCCTGTGT TGCGATTGGA CGAAACACCG GATCTTCCGG ATCGGTCTAT
TCCTTTGTGG CCATCGGTGA CGGAGTAACG GGTTCTGATT ATTCTTCGGC GGTTGGTGCG
AATGCTGTCA ATGGACAAGG ATCTTGTATC CTTGGAAATT ATGCCAGTGC TGCCTATTGG
GGGCATGCGA TTGGTCGTTA CGCAACGGCT GGCAATTATG CAACGGCCAT TGGAACATCG
TCGAACGCAT ACGCGCACTC AATCGCTATT GGACAGAGCG CGGCAACCAC CTCTGCGGGT
GAAGTTGTGT TACGCGCGAA TGCCATCGAC CTGCTGCGCA TCTCTAGCGC TGGCGTGGCT
ATCTACGGTG GCGCTTATAC ACTCCCCATT ACCGATGGTA GCGCCGGTCA GGTGCTGCAA
ACCGATGGTG CGGGCAATCT CTCTTGGGTC ACTTTATAA
 
Protein sequence
MADQPLTQLP ALLDVQESDL LYAVRDGQSK QLDVATLRGM NEGLYAPVSH GHSLSDITDA 
GQAAALAVGT TPGTVAAGDH NHSGLYQPHF TSSYTLPSAD GSSGQVPQTN GAGVVSWVDM
AAGGGGATAL NELSDVAYLA GASGYVIMDD GVETPQPGQI AIGDLNGASY AGAISIGMNV
TTTGLNAVVI GAGASGGVQD VALGYGATAT GYGVAVGTNA KAKSACVAIG RNTGSSGSVY
SFVAIGDGVT GSDYSSAVGA NAVNGQGSCI LGNYASAAYW GHAIGRYATA GNYATAIGTS
SNAYAHSIAI GQSAATTSAG EVVLRANAID LLRISSAGVA IYGGAYTLPI TDGSAGQVLQ
TDGAGNLSWV TL