Gene Mmc1_1711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1711 
Symbol 
ID4481299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2115027 
End bp2116328 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content55% 
IMG OID639722454 
Productpeptidase U32 
Protein accessionYP_865626 
Protein GI117925009 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0826] Collagenase and related proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTGA GTTTCTCCAT GTCCATACCT GAGCTGTTAG CCCCTGCGGG CACCATGAAG 
AGTTTACATT ATGCGCTGGC CTATGGGGCT GATGCGGTTT ATGTGGGGTT GCCGCGTTAT
AGCCTGCGGG TGCGGGAGAA TGAATTTGAT GTGGCTGGTT TGCAGGAGGC GCTACATATT
ACCCGCGCGG CGCAAAAAAA ACTCTATGTC GCGTGTAATA TTGTCGCCCG CGACAGCAAA
ATAGATACCT TTTTTAAAGA TATGGAACCT GTGCTGGCGA TGCAACCGGA TGCTTTAATT
GTCTCTGATC CCGGCATTAT CCATATGGTT AGGCAGCGGT GGCCCAATCA GGTGCTGCAC
CTGTCGGTGC AGGCCAATGT GGTGAATTCT GAAGCGGTAA AATTTTGGTC AGCGGTGGGT
ATTGCCCGCA TTATCCTCTC CCGCGAACTC TCCATTGAGG AAATGGCGGT TATTCGCCAA
CGCTGCCCGG ATGTGGAGTT GGAGGCTTTT ATTCATGGGG CGCTCTGTGT GGCCTACTCC
GGGCGCTGTT TGCTGTCTGG CTATATGAGC CACCGAGATC CCAACCAAGG TGCCTGTACC
AATGCCTGTC GCTGGTCCTA TACGGCTAAG CCCGCCCAAC AGACCGTGGA GGGGCATATT
ATTCCCATCC AAGCACCGGC TCCACTCTAC TTAATAGAGG AGCAGTACCG CCCAGATGAG
TGGATGGTGA TGGAAGAGGA TGAGCATGGT ACCTATGTGT TCAACTCCAA AGATTTGCGT
GCTATCCGCC ATGTGGAGGC GCTGGCCCAT ATGGGCATGG ACTCTCTCAA AATTGAGGGT
CGCACCAAAT CGTTTTTTTA TGTTGCGCGC ACGGTGCAGG TCTATCGTAT GGCGCTGGAC
GCCGCCGCGC GGGGGGAAGC CTTTGATCCC AATTGGTTGT TGGCTCTGGA TGATCTGGCC
AACCGAGGCT ATACCGAGGG ATTTTATGAC CGCCACGCTC CAGCCGAACT GCAAAACTAT
GAGACCGGCA GCACCCAGAA CAGCCAGCAG TTTATAGGTG AAATCGTGGG GCAAGATGCA
GGCCGCTTGC GGGTCGATGT CAAAAACCGC TTTCGGGTGG GGGAAGAGAT TGAGTTGATG
ACCCCGGCGG GCAACCATCG CTTTATCTTG GGCGGCATGC AAAAACGTGA TGGTACCGCC
ATGGAGGTTG CGCCGGGCTC TGGCCACGAG GTGCTGATAC CCATACCCGC CGCGCTCAAC
TTAACCGATA ACCACGCCAT GTTGTTGGTG CGTTGCGCCT AG
 
Protein sequence
MPLSFSMSIP ELLAPAGTMK SLHYALAYGA DAVYVGLPRY SLRVRENEFD VAGLQEALHI 
TRAAQKKLYV ACNIVARDSK IDTFFKDMEP VLAMQPDALI VSDPGIIHMV RQRWPNQVLH
LSVQANVVNS EAVKFWSAVG IARIILSREL SIEEMAVIRQ RCPDVELEAF IHGALCVAYS
GRCLLSGYMS HRDPNQGACT NACRWSYTAK PAQQTVEGHI IPIQAPAPLY LIEEQYRPDE
WMVMEEDEHG TYVFNSKDLR AIRHVEALAH MGMDSLKIEG RTKSFFYVAR TVQVYRMALD
AAARGEAFDP NWLLALDDLA NRGYTEGFYD RHAPAELQNY ETGSTQNSQQ FIGEIVGQDA
GRLRVDVKNR FRVGEEIELM TPAGNHRFIL GGMQKRDGTA MEVAPGSGHE VLIPIPAALN
LTDNHAMLLV RCA