| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1710 |
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| Symbol | |
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| ID | 4481298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 2112728 |
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| End bp | 2114890 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639722453 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_865625 |
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| Protein GI | 117925008 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.425295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTGTGGCG TGTGTGGTTT TATATCGGGC TTGGAACATA CTATGGTGAC ACCTGTGGTG
GATAAACATA CGCTAGAGCA GAATGGGCGA ACACCCCTGG TGATGGTGGT GGACGACGAT
ACGGCGATTC AAACGTTGCT CTGCCACTTT ATGAAAAAAA TTGGCTGGTC CTATGTGACC
GCGATGCATG GCCAAGAGGC GATTGATCTT ATCCCCAAGT GTCAGCCTGA TGTCATTTTG
ATGGATGCTA AAATGCCCGT CTTAGATGGT TTTGAGGCTT GCAAACGCAT TAAAGAAAAC
CCAGTTACAG CCCACATCCA GGTACTGATC ATCACCAGCC TTGAAGATGA TGAATCCATT
AACCATGCTT ACGAGGTGGG CGCATCGGAC TATGTGCCCA AGCCAATACA TTGGGTGAGC
CTGCAAAACC GTGTGCAGTT TCTCTATAAA ATGATGGTGG CTGAGCGCCA GTTAATGTTG
ACGGCCAAGG TGTTTGAAAA TACCACAGAA GGCATTGTGG TCACCGATAG CACAGCGTGC
ATTACCAATG TAAACCCCTC CTTTGAAGCC ATTACGGGAT ATGATCGCGG CAGTGTGCTG
GGACAAAATA TAAGCATTTT GCAGTCAGGC CGGCATGACC GGCGCTTTTA CGGTAAAATG
TGGCAAACCC TGCTTACCGC CGGTAAGTGG CAGGGGGAAG TGTGGAACCG CCGAAAAAAT
GGGGAAATAT ATCCGCAGTG GGTCAATATC AGTGCCATTC GTACCGGGGA TGGCCAAACC
GAAAGCTATG TGGGGGTGTT CACCGATTTA ACCCGCATTA AGGAGTCAGA AGAAAATCTG
CTCTACCTGT CAGGTCACGA CGCACTCACC GAACTGCCCA ATCGACTGCT CTTTCATGAC
CGACTTAACC AAACCCTGGT AGAGTCGGCA GATAGTGGCA GTATTGTCGC TGTGCTCATT
GTGGATTTGG ACCGTTTTAA GGTTATTAAC GACTCTATGG GACATGAGGT TGGGGATAGC
TTGCTGTGTG AGGTGGCAAC TCGTCTGCGC GCGATATGTC CGGCTAAGGC GACGTTGGCC
CGTTTGGGGG GGGATGAATT CGGCATTGTG CTGCCTAACA TGACCCAAAA CCGGGATGCC
GCCCTGTTAG CTCAAGAGGT GCTAACCCGT GTCGCACAGC CCATTACCAT AAGCGAAGTG
GAGTTTGCGG TTGGTGCCAG TATTGGCATG ACGGTCTATC CCTTGGATGG CGAAAAGCCC
AGCGTGCTCA TGCGTAATGC TGAGTCAGCC ATGTACCACG CCAAACAGAG TGGGCGGAAT
AATTTTCAAT TCTACCGTTC TGAACTCAAC ACGGCTTCTT TGGCGCGTAT CCTCTTGGAA
AGCGGTCTAC GCAATGCGGT GGACCGACAA GAGTTTTTGC TTTTTTATCA GCCTCAAATG
GAGCTTGCTA CTGGTAAATT GATTGGAATG GAAGCCTTGA TCCGCTGGCA GCATCCCGAG
CAAGGCATGG TCTCTCCCGG TGAATTTATT CCCCTTGCGG AAGAGACTGG CTTGGTTATC
CCCATGGGGC AGTGGGCGCT TAAAGAGGCG TGTCGCCAAA GTAAAGTATG GATGGATCAG
ACGGGGGTGC CTTTGCGTAT TTCGGTTAAC CTGTCGGGTA TTCAATTTAG ATTGCCAGAT
TTTACCGAAA TGGTCATGCG TACCGTGGGG GAATCTGGAC TGCCGCCTCA CTGCTTGGAG
TTGGAACTTA CCGAATCCAT CGCCATGGGC GATGTCGAAG AGACTCTGGA AAAATTAACC
ATCCTCTCTC GTTTTGGGGT ACTGCTGGCC ATTGATGATT TTGGTACAGG TTTTTCCTCG
TTGAGTTATT TGAAAAAATT TCCGATTGAT ACCTTGAAAA TTGATCAATC GTTCGTTCGC
AATTGCACCA GGGATCCTGA GGATGCAGCC ATTATTCGCG CCTTTATTAA TTTGGCCCAC
AGTCTTAACC TAGAGGTCAT TGCCGAAGGG GTGGAGCACC TGGAACAGTT GGAATTTCTG
GCCCAGGAGT CTTGTGATGA GATCCAGGGC TATTTTTATG GCCGTCCTTT GAGTGGGGAT
AAATTTGAGA TGTTTATGCT GGACGCCTTT GCCAAAAAGG CACAGCCACA AACCCTACTC
TGA
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| Protein sequence | MCGVCGFISG LEHTMVTPVV DKHTLEQNGR TPLVMVVDDD TAIQTLLCHF MKKIGWSYVT
AMHGQEAIDL IPKCQPDVIL MDAKMPVLDG FEACKRIKEN PVTAHIQVLI ITSLEDDESI
NHAYEVGASD YVPKPIHWVS LQNRVQFLYK MMVAERQLML TAKVFENTTE GIVVTDSTAC
ITNVNPSFEA ITGYDRGSVL GQNISILQSG RHDRRFYGKM WQTLLTAGKW QGEVWNRRKN
GEIYPQWVNI SAIRTGDGQT ESYVGVFTDL TRIKESEENL LYLSGHDALT ELPNRLLFHD
RLNQTLVESA DSGSIVAVLI VDLDRFKVIN DSMGHEVGDS LLCEVATRLR AICPAKATLA
RLGGDEFGIV LPNMTQNRDA ALLAQEVLTR VAQPITISEV EFAVGASIGM TVYPLDGEKP
SVLMRNAESA MYHAKQSGRN NFQFYRSELN TASLARILLE SGLRNAVDRQ EFLLFYQPQM
ELATGKLIGM EALIRWQHPE QGMVSPGEFI PLAEETGLVI PMGQWALKEA CRQSKVWMDQ
TGVPLRISVN LSGIQFRLPD FTEMVMRTVG ESGLPPHCLE LELTESIAMG DVEETLEKLT
ILSRFGVLLA IDDFGTGFSS LSYLKKFPID TLKIDQSFVR NCTRDPEDAA IIRAFINLAH
SLNLEVIAEG VEHLEQLEFL AQESCDEIQG YFYGRPLSGD KFEMFMLDAF AKKAQPQTLL
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