Gene Mmc1_1710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1710 
Symbol 
ID4481298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2112728 
End bp2114890 
Gene Length2163 bp 
Protein Length720 aa 
Translation table11 
GC content50% 
IMG OID639722453 
Productresponse regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 
Protein accessionYP_865625 
Protein GI117925008 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.425295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGTGGCG TGTGTGGTTT TATATCGGGC TTGGAACATA CTATGGTGAC ACCTGTGGTG 
GATAAACATA CGCTAGAGCA GAATGGGCGA ACACCCCTGG TGATGGTGGT GGACGACGAT
ACGGCGATTC AAACGTTGCT CTGCCACTTT ATGAAAAAAA TTGGCTGGTC CTATGTGACC
GCGATGCATG GCCAAGAGGC GATTGATCTT ATCCCCAAGT GTCAGCCTGA TGTCATTTTG
ATGGATGCTA AAATGCCCGT CTTAGATGGT TTTGAGGCTT GCAAACGCAT TAAAGAAAAC
CCAGTTACAG CCCACATCCA GGTACTGATC ATCACCAGCC TTGAAGATGA TGAATCCATT
AACCATGCTT ACGAGGTGGG CGCATCGGAC TATGTGCCCA AGCCAATACA TTGGGTGAGC
CTGCAAAACC GTGTGCAGTT TCTCTATAAA ATGATGGTGG CTGAGCGCCA GTTAATGTTG
ACGGCCAAGG TGTTTGAAAA TACCACAGAA GGCATTGTGG TCACCGATAG CACAGCGTGC
ATTACCAATG TAAACCCCTC CTTTGAAGCC ATTACGGGAT ATGATCGCGG CAGTGTGCTG
GGACAAAATA TAAGCATTTT GCAGTCAGGC CGGCATGACC GGCGCTTTTA CGGTAAAATG
TGGCAAACCC TGCTTACCGC CGGTAAGTGG CAGGGGGAAG TGTGGAACCG CCGAAAAAAT
GGGGAAATAT ATCCGCAGTG GGTCAATATC AGTGCCATTC GTACCGGGGA TGGCCAAACC
GAAAGCTATG TGGGGGTGTT CACCGATTTA ACCCGCATTA AGGAGTCAGA AGAAAATCTG
CTCTACCTGT CAGGTCACGA CGCACTCACC GAACTGCCCA ATCGACTGCT CTTTCATGAC
CGACTTAACC AAACCCTGGT AGAGTCGGCA GATAGTGGCA GTATTGTCGC TGTGCTCATT
GTGGATTTGG ACCGTTTTAA GGTTATTAAC GACTCTATGG GACATGAGGT TGGGGATAGC
TTGCTGTGTG AGGTGGCAAC TCGTCTGCGC GCGATATGTC CGGCTAAGGC GACGTTGGCC
CGTTTGGGGG GGGATGAATT CGGCATTGTG CTGCCTAACA TGACCCAAAA CCGGGATGCC
GCCCTGTTAG CTCAAGAGGT GCTAACCCGT GTCGCACAGC CCATTACCAT AAGCGAAGTG
GAGTTTGCGG TTGGTGCCAG TATTGGCATG ACGGTCTATC CCTTGGATGG CGAAAAGCCC
AGCGTGCTCA TGCGTAATGC TGAGTCAGCC ATGTACCACG CCAAACAGAG TGGGCGGAAT
AATTTTCAAT TCTACCGTTC TGAACTCAAC ACGGCTTCTT TGGCGCGTAT CCTCTTGGAA
AGCGGTCTAC GCAATGCGGT GGACCGACAA GAGTTTTTGC TTTTTTATCA GCCTCAAATG
GAGCTTGCTA CTGGTAAATT GATTGGAATG GAAGCCTTGA TCCGCTGGCA GCATCCCGAG
CAAGGCATGG TCTCTCCCGG TGAATTTATT CCCCTTGCGG AAGAGACTGG CTTGGTTATC
CCCATGGGGC AGTGGGCGCT TAAAGAGGCG TGTCGCCAAA GTAAAGTATG GATGGATCAG
ACGGGGGTGC CTTTGCGTAT TTCGGTTAAC CTGTCGGGTA TTCAATTTAG ATTGCCAGAT
TTTACCGAAA TGGTCATGCG TACCGTGGGG GAATCTGGAC TGCCGCCTCA CTGCTTGGAG
TTGGAACTTA CCGAATCCAT CGCCATGGGC GATGTCGAAG AGACTCTGGA AAAATTAACC
ATCCTCTCTC GTTTTGGGGT ACTGCTGGCC ATTGATGATT TTGGTACAGG TTTTTCCTCG
TTGAGTTATT TGAAAAAATT TCCGATTGAT ACCTTGAAAA TTGATCAATC GTTCGTTCGC
AATTGCACCA GGGATCCTGA GGATGCAGCC ATTATTCGCG CCTTTATTAA TTTGGCCCAC
AGTCTTAACC TAGAGGTCAT TGCCGAAGGG GTGGAGCACC TGGAACAGTT GGAATTTCTG
GCCCAGGAGT CTTGTGATGA GATCCAGGGC TATTTTTATG GCCGTCCTTT GAGTGGGGAT
AAATTTGAGA TGTTTATGCT GGACGCCTTT GCCAAAAAGG CACAGCCACA AACCCTACTC
TGA
 
Protein sequence
MCGVCGFISG LEHTMVTPVV DKHTLEQNGR TPLVMVVDDD TAIQTLLCHF MKKIGWSYVT 
AMHGQEAIDL IPKCQPDVIL MDAKMPVLDG FEACKRIKEN PVTAHIQVLI ITSLEDDESI
NHAYEVGASD YVPKPIHWVS LQNRVQFLYK MMVAERQLML TAKVFENTTE GIVVTDSTAC
ITNVNPSFEA ITGYDRGSVL GQNISILQSG RHDRRFYGKM WQTLLTAGKW QGEVWNRRKN
GEIYPQWVNI SAIRTGDGQT ESYVGVFTDL TRIKESEENL LYLSGHDALT ELPNRLLFHD
RLNQTLVESA DSGSIVAVLI VDLDRFKVIN DSMGHEVGDS LLCEVATRLR AICPAKATLA
RLGGDEFGIV LPNMTQNRDA ALLAQEVLTR VAQPITISEV EFAVGASIGM TVYPLDGEKP
SVLMRNAESA MYHAKQSGRN NFQFYRSELN TASLARILLE SGLRNAVDRQ EFLLFYQPQM
ELATGKLIGM EALIRWQHPE QGMVSPGEFI PLAEETGLVI PMGQWALKEA CRQSKVWMDQ
TGVPLRISVN LSGIQFRLPD FTEMVMRTVG ESGLPPHCLE LELTESIAMG DVEETLEKLT
ILSRFGVLLA IDDFGTGFSS LSYLKKFPID TLKIDQSFVR NCTRDPEDAA IIRAFINLAH
SLNLEVIAEG VEHLEQLEFL AQESCDEIQG YFYGRPLSGD KFEMFMLDAF AKKAQPQTLL