Gene Mmc1_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1708 
Symbol 
ID4482315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2110549 
End bp2111280 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content51% 
IMG OID639722451 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_865623 
Protein GI117925006 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00355852 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGG ATAGAAGAAC GGTTCTCGGC CTAGGCGGCG CCATGGCCGT CGGGGCTATG 
GTGGCTCCCG GAATGCGTCT TATCGCAGCC CCCATGCAAA AGGGTGCCAA TGCCGGCGCC
CGTTGGGCTA TGCTCATTGA CCTGAGCAAG TGCAGCGAGG ATTGCACCGA CTGCACGACG
GCCTGTGCGA CAGAGAATAA CATTCCTCAA ATTGAGGATC AGTCGCGCCA AATCCAATAC
ATTCGCAAAA TTACCATCAC GGATAAAACA GGTAAAAAGC CTCAGCAGAG TCTGCCGGTT
TTGTGTAACC ATTGCGAAAA CCCCCCCTGT GTGGATGTCT GCCCTACCAA CGCTTCATTT
ATTCGTAAAG ATGGCTTGGT GTTGGTGGAT AAGCACCGCT GCATTGGTTG TCGCTACTGT
ATGATCGCGT GTCCTTATAA AGCGCGTTCC TTGGTTTATC ACGAAAATAC CACCCCTAAA
GATCAGCTTA ATCGTGAGGT GCCCATTCGC GCCAAGGGTG TGGTGGAAAA GTGCAGCTTC
TGCGTACACC GTATTGACAA AGGTGAGATC CCTGCTTGTG TTGAGGCGTG CGGCAAGAAG
AGTGGGGCCA TGTTATTTGG TGATATCAAT GACCCTAAAT CGGAAATTGC CCAAAAGCTG
GCTCAAGTAA CCAGCAAAAC CATTCGTGAT GATCTGGGTC TCAAACCCCA CGTTCATTAC
ACGAACCTTT AA
 
Protein sequence
MTMDRRTVLG LGGAMAVGAM VAPGMRLIAA PMQKGANAGA RWAMLIDLSK CSEDCTDCTT 
ACATENNIPQ IEDQSRQIQY IRKITITDKT GKKPQQSLPV LCNHCENPPC VDVCPTNASF
IRKDGLVLVD KHRCIGCRYC MIACPYKARS LVYHENTTPK DQLNREVPIR AKGVVEKCSF
CVHRIDKGEI PACVEACGKK SGAMLFGDIN DPKSEIAQKL AQVTSKTIRD DLGLKPHVHY
TNL