Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1683 |
Symbol | |
ID | 4481703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2085246 |
End bp | 2085953 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639722426 |
Product | cob(II)yrinic acid a,c-diamide reductase |
Protein accession | YP_865598 |
Protein GI | 117924981 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | [TIGR02476] cob(II)yrinic acid a,c-diamide reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000634411 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCTTTT CAAAAGAGCA ACGTCAAGCC GTTTACGACA CCATTTTCGC AAGACGTGAT GTCCGTGGTG AATTTTTACC CGATCCCATA CCCGACGCTG TACTCAGCCG TTTACTCTTG GCCGCGCACC ACGCCCCATC GGTTGGTTTT ATGCAGCCGT GGAATTTTCT GATTATCCGG CAACCAACGG TCAAACAGCA GGTGCATCAA GCCTTTCAAA AAGCGAATGA CGAGGCGGCG CAACAATTTA GTGGGGAACA GGCCGATCGC TACCGCCGCT TAAAATTAGA AGGTATTTTA GAAGCGCCCA TAAACCTTTG CATGACGTGT GATCGAGATC GCTGTGGTCC TGTTGTGCTG GGACGCACCC ACATGCCAGA GATGGATCTC TACAGTACAG TATGTGCGGT GCAAAATTTA TGGTTGGCGG CCCGCGCCGA AGGGGTTGGC GTTGGCTGGG TAAGTATTTT AGATCCTGCG GCGCTAAAGT CTATTTTACG CATAACCACG GCCAACATTG TGCCGGTGGC CTATCTTTGC ATGGGCTATG TCTCACATTT TCATGGGGAG CCTGAACTGG CAAGCAAAGG TTGGCGTCAA CGCTTAGACC CCGCTTCATT AATCTACTAT GATCAATGGG GGCAGCAGGA GAGCCCCCAT AAACTTGATG AAGCGTTAGG CGCTCAGCGT CGTTTATTAT TACTCTAA
|
Protein sequence | MSFSKEQRQA VYDTIFARRD VRGEFLPDPI PDAVLSRLLL AAHHAPSVGF MQPWNFLIIR QPTVKQQVHQ AFQKANDEAA QQFSGEQADR YRRLKLEGIL EAPINLCMTC DRDRCGPVVL GRTHMPEMDL YSTVCAVQNL WLAARAEGVG VGWVSILDPA ALKSILRITT ANIVPVAYLC MGYVSHFHGE PELASKGWRQ RLDPASLIYY DQWGQQESPH KLDEALGAQR RLLLL
|
| |