| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1678 |
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| Symbol | |
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| ID | 4481698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 2079752 |
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| End bp | 2081353 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639722421 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_865593 |
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| Protein GI | 117924976 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0068133 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.55837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCCATG CCCCAGGAGC GCTGGCAGAA ATCATCAACA AACGGCGCAC CTTCGCCATT
ATTTCACACC CTGACGCGGG AAAAACCACG CTGACGGAAA AATTGCTGCT GTTTGGCGGT
GCGATCCAAC TGGCCGGTGC GGTGAAAGCC CGTGGGGAAC AGCGCCGGGC AACATCCGAC
TGGATGGCCG TGGAAAAAGA GCGGGGTATC TCGGTCACAG CCTCGGTGAT GACCTTTGAG
TATGGCCAAC ATACCTTTAA CCTGCTGGAT ACCCCAGGCC ACGCCGATTT TAGTGAAGAT
ACCTACCGTA CCCTCACGGC GGTGGATTCG GCGGTGATGG TGCTGGATGC CGCAAAAGGG
ATCGAGACCC AAACCCGTAA ATTGTTTGAA GTGTGCCGTC TGCGGGATAT TCCCATTACC
ACCTTTATCA ATAAATTGGA CCGTGAGGGA CAAGATCCCT TTGCGCTGCT GGATGAGGTG
GAGCAAAGTC TGGCCCTGGA GGTCACACCA GCCAGTTGGC CAATTGGCAT GGGGCGAAGT
TTTCTCGGTT GCTACGACCT GTTTAACGAC CAATTGCTGT TCATGGAAAA AAGCCGCGAT
AAAGTTACCA GTTCTGTGCA GTGCCACGGC TTAGATGACC CCAAAATTGA TGAACTGCTG
CCCGCGGATC TCGCTGAAAA ATTGCGTGAA GATGTGGCCA TGGCCCGTGA ACTCTGCCCG
CCTTTTGATC TGAAAGCCTA TCGAGAAGGG ACCTTAACCC CAGTCTATTT TGGGAGTGCC
ATCAATAATT TTGGTGTGCA AGAGTTGCTG GAAGGGATTG CTAAACATGC CCCGCCCCCG
CGCGCCCAAA AAGCTCAAGA GCGGCAAGTG GAGCCAGATG AAGAGAAATT TAGCGGCTTT
GTCTTTAAAA TCCAGGCTAA TATGGACCCT AAACATCGGG ATAGAATCGC CTTTTTCCGC
ATCTGTTCGG GTAAATTCGA GCGGGGGATG AAAGTCAAAC ATGTGCGCTC TCAAAAAATC
CTAAACCTGC ACAACCCTGT GCTGTTTTTA GCCCAGGATA GGGAACGCGC CGAAGAAGCC
TTTGCCGGGG ATATTTTGGG AATTCCCAAC CATGGCAACC TGCGCATTGG AGATACCTTG
TCAGAAGGGG AATCTCTACA CTATACGGGC ATCCCCAGTT TTGCCCCAGA GATGCTGCGT
AAAGTCAGGC CGGACGATCC GATGAAAGCC AAACATCTTG GCCGTACCTT GGTACAACTG
GGCGAAGAGG GGGCCGCGCG GGTGTTTAAA GCCAACTTGG GTGGGGATTG GATTATCGGT
GTGCTGGGGG CGTTGCAATT TGAAGTGCTG GGGGATCGTA TCCGCACAGA ATATGCCATA
CCCGTTCACT ATGAATCGAC CCAATTGCAC ACCGCACGCT GGGTGGAGGC CGATGACCAC
CGTTTGCTTA AACAGTTTGT TGACCGTCAC CAAGTGGATA TGGCAGAAGA TCATGAAGGC
GCGCCAGTCT TTTTGGCACG TAATGCATGG CACTTGAATA CCGCCCAGGA AAACTTTCCC
AAAGTGCGGT TTCTACAGAC GAAAGAGCAG ACCGTCGGTT AG
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| Protein sequence | MSHAPGALAE IINKRRTFAI ISHPDAGKTT LTEKLLLFGG AIQLAGAVKA RGEQRRATSD
WMAVEKERGI SVTASVMTFE YGQHTFNLLD TPGHADFSED TYRTLTAVDS AVMVLDAAKG
IETQTRKLFE VCRLRDIPIT TFINKLDREG QDPFALLDEV EQSLALEVTP ASWPIGMGRS
FLGCYDLFND QLLFMEKSRD KVTSSVQCHG LDDPKIDELL PADLAEKLRE DVAMARELCP
PFDLKAYREG TLTPVYFGSA INNFGVQELL EGIAKHAPPP RAQKAQERQV EPDEEKFSGF
VFKIQANMDP KHRDRIAFFR ICSGKFERGM KVKHVRSQKI LNLHNPVLFL AQDRERAEEA
FAGDILGIPN HGNLRIGDTL SEGESLHYTG IPSFAPEMLR KVRPDDPMKA KHLGRTLVQL
GEEGAARVFK ANLGGDWIIG VLGALQFEVL GDRIRTEYAI PVHYESTQLH TARWVEADDH
RLLKQFVDRH QVDMAEDHEG APVFLARNAW HLNTAQENFP KVRFLQTKEQ TVG
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