| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1666 |
|---|
| Symbol | |
|---|
| ID | 4480728 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 2067891 |
|---|
| End bp | 2068877 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639722409 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_865581 |
|---|
| Protein GI | 117924964 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0426] Uncharacterized flavoproteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCC CCACCCCCTT TACCGAACTT GGTCACGGCA TCACCTGCAT TGATGCCGAT
TTTCATCGTC CTGGCATGGC CGCCTGTTAC CTTATGGTAG AGGGCAGCCG GGCTGCCTTT
ATCGAGACGG GCACCCGCTA TTCGGTAGCG GCCATGGTGC AGGCCCTGGA ACACAACCGC
ATCCTGCCCA CTGAGGTTGA GTATGTCATC ATTACCCATG TGCATCTGGA TCATGCGGGT
GGTGCGGGGC AGTTGATGCA GTTAATGCCC AACGCCAAAT TGGTGGTCCA TCCACGGGGT
GCGCGGCACA TGATTGATCC GAGCAAACTG ACGGAGAGCG CCAAACAGGT CTATGGGGAG
GCCGCCTTTT TACGCACCTA TGGGTCCATA GAACCCATCG CGGCAGAGCG GGTTATCGAA
ACCCAAGATG AGGATATTTT ATCTTTGAAT GGGCGGCCCT TGCAGTTTTT CGACACCCAA
GGCCACGCCA AGCATCACTT TTGTGTGTGG GACGCCCACA GCCGAGGTAT TTTTACCGGG
GATACCTTTG GCATCTCCTA CCGCGAGTTG GATTATCAAG GCAAGCACTT CCTGTTTCCC
ACCACCACCC CCACCCAGTT TGATCCCGAG CAGGCGCACA AAACGGTGGA TCGTTTGGCG
GGGCTCCATC CACAGCAGCT CTACCTTACC CACTTTGGCA TGATCCCGTT TGAGAGGCGT
CTGGTGGAGG ATATGCATCG GCAGTTGCAG CACATTGAGC TGTTTACCCG TGCCGCGCCC
GAAGATAAGA CGCAACGCGC CCACTATTTA CGTCAAGCCT GTATTGAGAT GTATCGAAGT
GAGTTGATGA ACATCGGCCA CCCATCTACC CAAGCGGCAC AGTTGGTCGA GCAGTGGCTT
ATGATGGATA TGGAGATCAA CGCCCAGGGG TTGGAGGTGT GGTTGGAGAT AGTTGCTCAA
CAACGCGCCA AAGGGGTGGT GGCCTAA
|
|---|
| Protein sequence | MTRPTPFTEL GHGITCIDAD FHRPGMAACY LMVEGSRAAF IETGTRYSVA AMVQALEHNR
ILPTEVEYVI ITHVHLDHAG GAGQLMQLMP NAKLVVHPRG ARHMIDPSKL TESAKQVYGE
AAFLRTYGSI EPIAAERVIE TQDEDILSLN GRPLQFFDTQ GHAKHHFCVW DAHSRGIFTG
DTFGISYREL DYQGKHFLFP TTTPTQFDPE QAHKTVDRLA GLHPQQLYLT HFGMIPFERR
LVEDMHRQLQ HIELFTRAAP EDKTQRAHYL RQACIEMYRS ELMNIGHPST QAAQLVEQWL
MMDMEINAQG LEVWLEIVAQ QRAKGVVA
|
|---|
| |