Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1652 |
Symbol | |
ID | 4484029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2053510 |
End bp | 2054199 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639722395 |
Product | hypothetical protein |
Protein accession | YP_865567 |
Protein GI | 117924950 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1102] Cytidylate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000202399 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.336802 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACG CACGTACCCA GGCTCTGTTA CAGTCCATTA TGGGCGCGAA AATGTACCAG AGCAGCGACA AAGATGAGAC CCCTTCCACG GTTCCACTCA TCACGGTTTC TCGTGGGTTT GGTGCCAATG GCAGTGAAAT TGCCGCCCGC TTAGCTGAAC GGCTACAGGT CCCGCTGTAT GATAAAGAGC TGATCAATGA GGTCACACGA CAGGCCAAAG CTGATCCCTT TTTAACCAAA CAGTTGGATG AGCGCATCTC GGGTGCCATG GCGGATTGGA TTACCTCCAT GTTCACCGGC CAATCGACCA GCCAAGATAC CTTTAACTAT TATATGGTTA AGGTTATCAT GAATATTGCC CCACAGGGTG GTGTTATTGT TGGACGCGGC GCCCACCTGC TGCTTAGCCA GAAACACAGG GTCTTCAGAC TGCGCGTCGA GGGTTCTTTG CATGTTTGTG CCGAGCGGGT CGCCAAACGC GAAGATATCA AGCTGAAAAA GGCTGAAAAG CGGGTCGTCC AAGTGGACAA AGAGCGCCGC GATTTTGTCG AGGGGCTGTA TAAAAATCGC TCAACCCGCC ACAACTTCTA TGACATGGTG ATCAATACGG ATCTCTTTAA GCCCCAAGCC ACGGTAGGTG TGGTGGAGTT GGCTTTGGCA GAGATGGGAT TTGTCATTCC TAAAAAATAA
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Protein sequence | MSNARTQALL QSIMGAKMYQ SSDKDETPST VPLITVSRGF GANGSEIAAR LAERLQVPLY DKELINEVTR QAKADPFLTK QLDERISGAM ADWITSMFTG QSTSQDTFNY YMVKVIMNIA PQGGVIVGRG AHLLLSQKHR VFRLRVEGSL HVCAERVAKR EDIKLKKAEK RVVQVDKERR DFVEGLYKNR STRHNFYDMV INTDLFKPQA TVGVVELALA EMGFVIPKK
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