| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1644 |
|---|
| Symbol | |
|---|
| ID | 4484021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 2040631 |
|---|
| End bp | 2041683 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639722387 |
|---|
| Product | phosphate:acyl-[acyl carrier protein] acyltransferase |
|---|
| Protein accession | YP_865559 |
|---|
| Protein GI | 117924942 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
|---|
| TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00077142 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGTTC GTATTGCTCT GGATGCCATG GGTGGTGATA ACGCCCCACG CGCTGTCATT
GAAGGGATGT TGGAAGTTCA AAAAAAACGT CCTGAGGTGG TTTTTACCTT GGTGGGTATT
GAATCCCGCA TCCGTCAAGA GTTGGAGCAG ATGGGCGTTG AAGAGGATGG CTTTCGCATT
TGGCACGCCA GTGAAGTGGT GGAGATGGAT GAAAAGCCCG CTGTCGCGTT GCGGACCAAA
AAAGATTCCT CCATGCGGGT TGGGGCCAAT TTGGTTAAAG AGAACCAAGT AGATGCCTTT
GTCTCGGCGG GCAATACCGG TGCGCTCATG GCAACCGCCA AATTTGTGCT CAAAACCCTG
CGCGGCATTG ATCGTCCCGC CATCGCTTCG GTGATCCCCG CAGTTGGGGG AGAGACCCTC
ATGTTGGATT TAGGCGCCAA TGTGGATTGC AGCTCGGAAC ACCTCTGCCA GTTTGCCCTG
ATGGGGTCGA TCTTTGCCAA TGCCGTGTTG GGTGTGCGCG CCCCGCGCGT TGGATTGCTC
AATATTGGAG AAGAGGATAC CAAGGGTAAC GAACAGGTGC GAGATGCTGG GGAACAGCTT
AAAGCCCGCT CCGCAACCTT GATCCCCGGC GGCTCCTACG TGGGCAATGT CGAGGGCACC
GATATTTTTA AAGATACGGT GGATGTGGTT GTATGTGACG GTTTTGTGGG TAATGTGAGC
CTAAAAAGCA TTGAGGGGAC CGCCAAAATG CTCACCCACT ATCTGCGCGG AGCCTTTACC
AAAAATTGGA AAACCAAATT GATGTACCTG ATTGCCAGAC CTGCCCTGCG CTGCTTTCGT
GATGAAATGG ATCCCCGTAA ACACAACGGC GCGATCCTGC TGGGTCTCAA TGGGGTAGTG
GTCAAAAGCC ACGGTGGAGC CGACTCGGTT GCTTATGCCC ATGCCATCCA TGTGGCGGTG
GATCTGGCTG AAAAACAGGT GACCAAACGT ATTCGGGATG CCGTTGCTAA ATTTCGTGCT
GAAGGGACGC AACCCTCTGA CCCGGCAGTT TAA
|
|---|
| Protein sequence | MTVRIALDAM GGDNAPRAVI EGMLEVQKKR PEVVFTLVGI ESRIRQELEQ MGVEEDGFRI
WHASEVVEMD EKPAVALRTK KDSSMRVGAN LVKENQVDAF VSAGNTGALM ATAKFVLKTL
RGIDRPAIAS VIPAVGGETL MLDLGANVDC SSEHLCQFAL MGSIFANAVL GVRAPRVGLL
NIGEEDTKGN EQVRDAGEQL KARSATLIPG GSYVGNVEGT DIFKDTVDVV VCDGFVGNVS
LKSIEGTAKM LTHYLRGAFT KNWKTKLMYL IARPALRCFR DEMDPRKHNG AILLGLNGVV
VKSHGGADSV AYAHAIHVAV DLAEKQVTKR IRDAVAKFRA EGTQPSDPAV
|
|---|
| |