| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1641 |
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| Symbol | |
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| ID | 4481877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2037469 |
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| End bp | 2038788 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639722384 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_865556 |
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| Protein GI | 117924939 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00551625 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTGATT TTGCTTCGTT GAATCTTGTT AAACCCCTCC TTAATGCCTT AACTCAAGCT
GGTTACACCA CCCCAACCCC CATTCAAGCA CAGGCTATTC CGCATCTGTT GGCAGGTCGG
GATCTGCTGG GCATTGCCCA GACCGGGACA GGTAAAACCG CAGCTTTTGC ACTACCCATA
CTCAATAAGT TGAGCCAAAT TAAAGGTCGC CCCGCGCCCA ATGCGCCCCG CGCCTTGATC
CTTACCCCAA CCCGTGAGCT CGCTTCACAA ATCGGCAACA GCATCGCCGT TTATGGTAAG
CATGTGCCAA CCACCCACAC CGTTGTATTT GGTGGCGTGG GCAAACAGCC ACAGATTCGC
GCCCTCTCCC GTGGCGTTGA TATTTTGGTC GCTACCCCTG GCCGCTTACT GGATCTTATG
GGGGAGCGCC ATGTTCGCCT GGATCAGATT CAGGTTTTTG TACTGGATGA GGCCGACCGC
ATGCTGGACA TGGGCTTTAT CCATGATATC CGTCGCATCA TTAAGGTGAT CCCAGCTAAG
CGCCATACGC TGCTCTTTTC TGCCACCATG CCCAAGGATA TTGCAGAGCT GGCAGAGGGC
TTATTGACCA ATCCCGCCAA GGTTGAGGTC ACGCCAGAAT CCACGACGGT TGAGCGTATT
ACGCAAAAGG TGCTGTTTGT CGATAAACAG AACAAGCGTT CTTTGCTCAA AAATGTGCTT
GAGCATGAGT CTATTGAGCA GGTTTTGGTC TTTACCCGCA CCAAGCATGG GGCCAACCGG
GTGGCGGAGT ATCTTGACAA ACACCGCATT GCCTCTGCGG CGATTCATGG CAACAAATCC
CAAAGCGCCC GCGAAAAGGC ACTGGATGGC TTTCGCAAAG GCAAGTTAAA GGTTTTGGTA
GCGACAGATA TTGCGGCGCG GGGAATTGAT GTGGCGGGCA TTAGCCACGT GATCAATTTT
GACCTGCCCA ATGAGTCGGA AAGCTACGTG CACCGCATAG GCCGCACAGC GCGCGCTGGG
CGGGATGGCA ATGCCATCTC TTTTTGCGAT GCTGAAGAGC GCGGCTATCT GCTGGATATT
GAAAAGACCA TCCGCCAGAC CGTGCCGGTT GATATTGACC ATGAATTCCA TTGCGAAGTG
GTTGCCAACG CAGCCCCAAT CAAACCCAGC CGCAAACGCA GCAGCGGCCA TGGTGCCGGT
GGTGGCAATC CCCATGGTGG GGGACATCGT CGCGGCAACC CCAGTACCGC CAGCAAACCA
CGTCAGCATA GCGGACGTCG CACCCCATCC AGCAAGGGTC GTAGCGGTAG CGTAGCGTAA
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| Protein sequence | MSDFASLNLV KPLLNALTQA GYTTPTPIQA QAIPHLLAGR DLLGIAQTGT GKTAAFALPI
LNKLSQIKGR PAPNAPRALI LTPTRELASQ IGNSIAVYGK HVPTTHTVVF GGVGKQPQIR
ALSRGVDILV ATPGRLLDLM GERHVRLDQI QVFVLDEADR MLDMGFIHDI RRIIKVIPAK
RHTLLFSATM PKDIAELAEG LLTNPAKVEV TPESTTVERI TQKVLFVDKQ NKRSLLKNVL
EHESIEQVLV FTRTKHGANR VAEYLDKHRI ASAAIHGNKS QSAREKALDG FRKGKLKVLV
ATDIAARGID VAGISHVINF DLPNESESYV HRIGRTARAG RDGNAISFCD AEERGYLLDI
EKTIRQTVPV DIDHEFHCEV VANAAPIKPS RKRSSGHGAG GGNPHGGGHR RGNPSTASKP
RQHSGRRTPS SKGRSGSVA
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