| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1629 |
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| Symbol | |
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| ID | 4481864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2015378 |
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| End bp | 2016037 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639722371 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase / endonuclease III |
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| Protein accession | YP_865544 |
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| Protein GI | 117924927 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
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| TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.204448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCCGTA AGAGCAAACA CGAGATTGAA TCCATTTTCA GCACCCTCAA GGCGGCCAAT
CCCGAGCCTA AGAGTGAACT GGATTATCGC AACCCCTTTG AATTGCTGGT GGCGGTGGTG
CTCTCGGCCC AATCCACCGA TGCCGGAGTG AACAAGGCCA CCCCCGGACT GTTTGCCGCC
GCCCCCACCC CCCAAGCCAT GGCCGATTTG GGGGAAGAGG GTATCAAACC CTATATTCGT
ACCATCGGCC TGTTTAACAG CAAGGCCAAA AATTTGGGCT TGCTGGCAAA AAAGTTGGTT
GCGGAACATG ACAGCCAAGT ACCCCAGAGC CGCGAAGCGC TGCAAGCCCT GCCTGGGGTG
GGACGTAAAA CCGCCAATGT GGTATTGAAT GTTGCTTTTG GTCAGCCCAC CATGGCGGTA
GATACCCATG TTTTTCGGGT CTCGAACCGT TTGGGTCTGG TGAGTAGTAA AACCCCAGAG
TCAACTGAGG CCCCCTTGAT CAAGGTGATT CCCCCCCATT TTATGGACCA TGCCCACCAT
TGGTTGATAT TGTTGGGACG TTACACCTGC AAAGCACGTA AACCGTTATG TGAAAGCTGT
AGCGTGGCCC AGTGGTGCAG CACCGACCAG CGCCAGCAGC GTGTCGACCG CCAGAAATAA
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| Protein sequence | MARKSKHEIE SIFSTLKAAN PEPKSELDYR NPFELLVAVV LSAQSTDAGV NKATPGLFAA
APTPQAMADL GEEGIKPYIR TIGLFNSKAK NLGLLAKKLV AEHDSQVPQS REALQALPGV
GRKTANVVLN VAFGQPTMAV DTHVFRVSNR LGLVSSKTPE STEAPLIKVI PPHFMDHAHH
WLILLGRYTC KARKPLCESC SVAQWCSTDQ RQQRVDRQK
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