| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1613 |
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| Symbol | |
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| ID | 4480874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1995763 |
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| End bp | 1997148 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639722355 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_865528 |
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| Protein GI | 117924911 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.974282 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCGT ATGCCGCGCT CTACATGTTT GCTGGGGTCT GTGTGGTGCT GCTGTCGGGT
TATCCCGTGG CTTTTGCGCT AGGGGGAACC GCGCTGCTAT TTGCGTGGGG GGGATCTCTA
CTTGACCTTT ACGATCTAAG CGATCTGGCC TTTATGCCCA ACCGCCTGTT CGGCATTATG
ACCAACGATA CGCTGATTGC CGTACCGCTG TTTATCTTTA TGGGTATGGT GCTGGAACGC
TCCCGGGTGG CCGAACAGCT GCTGGATACC ATGGCCATGC TGTTTGGCCC ATTGCGGGGG
GGCTTGGGTA TCTCTGTCAC CCTGGTGGGC ATGCTGATGG CCGCTAGTAC CGGCATTGTG
GGGGCGACCG TCGTGACCAT GGGTCTGCTC TCGCTGCCAA CCATGCTGCG ACGCAACTAT
GATCCCGCTG TGGCGGCGGG TACCATCTGC GCCTCGGGTA CCTTGGGGCA AATTATCCCC
CCCTCCATTG TCTTGGTGCT GCTGGGGGAT GTGATCTCGG CCTCCTATCA ACAGGCGCAA
CTGCAAATGG GCAGCTACTC CCCCCGCACC ATCTCGGTGG GGGATCTGTT TGTGGGGGCG
TTGATTCCCG GTTTAATGCT GGTGGGGTTC TATATCCTTT ATCTGCTGTG GCTGGCTTGG
CGGCGGCCCG AGGCGGTACC CGCAATCCCC GCGCAAGAGC GCACCTTAAA AGGGCGGGCG
CTGGTTTTGC AGGTATTCAA GGTGCTGGTA CCACCACTGT TTTTAATCCT GGCGGTGCTG
GGCTCTATCC TTGGCGGGCT GGCGACGCCG ACCGAAGCGG CCTCGGTGGG GGCCATGGGG
GCCTTGCTGT TGGCGGCCCT GCAAAAACAG CTCACCCTGC AAACCCTGCA AAGGGTTATG
CAAGGCACCA CCCGTGTCAC CAGTATGGTC TTTTTAATCT TTGTGGGGGC AACCCTCTTT
TCCCTGGTTT TTCGGGGTTT TGGTGGCGAT CAGCTGGTCG CAGAGCTGCT ACAGGATCTA
CCCGGTGGTA AGTTTGGGGC GATGCTGGCT GTGATGCTGC TTATGTTTGT GTTGGGCTTT
TTTATTGATT TTATCGAGAT CACCTTTGTG GTGGTGCCCA TCGTTGGCCC CATTTTGCTC
ATGATGGGGT TTGACCCCAT CTGGTTGGGG GTGATGATCG CCATCAATTT ACAAACCTCG
TTTTTAACCC CGCCCTTTGG CTTTTCGCTC TTTTATCTAC GGGGGGTGGC CCCTGCGCAG
CTCTCTACGC TACAGATCTA TCGAGGGGTG TTGCCCTTTA TTGCCCTTCA GATGCTGGCT
TTAGCCGCGC TGGCACAGTG GCCCAATCTG GCGACATGGT TGCCGAGGCT GGTTTATGGC
GAGTAA
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| Protein sequence | MEAYAALYMF AGVCVVLLSG YPVAFALGGT ALLFAWGGSL LDLYDLSDLA FMPNRLFGIM
TNDTLIAVPL FIFMGMVLER SRVAEQLLDT MAMLFGPLRG GLGISVTLVG MLMAASTGIV
GATVVTMGLL SLPTMLRRNY DPAVAAGTIC ASGTLGQIIP PSIVLVLLGD VISASYQQAQ
LQMGSYSPRT ISVGDLFVGA LIPGLMLVGF YILYLLWLAW RRPEAVPAIP AQERTLKGRA
LVLQVFKVLV PPLFLILAVL GSILGGLATP TEAASVGAMG ALLLAALQKQ LTLQTLQRVM
QGTTRVTSMV FLIFVGATLF SLVFRGFGGD QLVAELLQDL PGGKFGAMLA VMLLMFVLGF
FIDFIEITFV VVPIVGPILL MMGFDPIWLG VMIAINLQTS FLTPPFGFSL FYLRGVAPAQ
LSTLQIYRGV LPFIALQMLA LAALAQWPNL ATWLPRLVYG E
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