| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1609 |
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| Symbol | |
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| ID | 4480870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 1990347 |
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| End bp | 1991384 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639722351 |
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| Product | twitching motility protein |
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| Protein accession | YP_865524 |
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| Protein GI | 117924907 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.409997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTGA ACGATCTGCT CACTTTTATC GTCCAGAATG GCGGCTCAGA TCTCCACCTC
TCTGCCGGGC TGCCCCCCAT GGTGCGGATT GATGGGGATG TGCGGCGCAT CGACGTACCC
ACCCAATCCA GTGACGATGT GCTGGCTATG CTGCACGGTA TTATGAACGA TGTGCAGAAA
CAGAGCTTTA CCGAAACCCA TGAATCCGAC TTTTCATTTG CGTTGGAGGG GGTTGCCCGT
TTTCGCGTCA ACGCCTTCAT GCAGCAACGG GGGGTGAGCG CGGTACTGCG GACCATTCCT
TCCGAGGTGC TCACCCTGGA ACAGCTGGGT GCCCCTGAGA TTTTTAAGGA GATTGCCGCC
ACCCCACGGG GCATTGTATT GGTCACGGGC CCCACCGGTT CGGGCAAATC CACCACACTG
GCGGCTATGG TGGATTATAA AAACAGTACC GATTATGGGC ACATTCTCAC GGTGGAAGAC
CCCATCGAAT TTGTACACCA GTCAAAAAAG AGTCTGGTTA GCCAACGCGA GGTGCATCGC
GATACCCTAA GTTTCACCAA CGCCCTCCGG GCTGCCCTAC GGGAAGATCC CGACACCATC
TTGGTTGGGG AGATGCGGGA TTTGGAGACC ATTCGTCTGG CTCTAACCGC CGCCGAGACC
GGTCACTTGG TGTTTGGTAC CCTGCATACC AGCTCCGCGC CCAAGACGGT GGATCGTATT
GTGGACGCCT TTCCTGCTGC GGAAAAAGAT ATGATCCGCA CCATGTTATC CGAATCCCTT
AAAGCGGTGA TCTCGCAAGT GCTGTTAAAA AAACGCGGCG GTGGGCGGGT TGCGGTACAC
GAAATTATGC TCGGCACGGG TGCCATTAAA AACCTGATTC GGGAGAATCA GGTTGCCCAG
ATGTACTCAT CCATTCAAAC AGGCCGCAAG CTAGGCATGC AAACTTTGGA ACAAGGTTTG
CAAGAGTGCA TACAGAAGGG TCTCATCACC CGCGAGCAGG CCTACGAAAA GGCCAACGTC
AAAGACCAGT TCAAATAA
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| Protein sequence | MELNDLLTFI VQNGGSDLHL SAGLPPMVRI DGDVRRIDVP TQSSDDVLAM LHGIMNDVQK
QSFTETHESD FSFALEGVAR FRVNAFMQQR GVSAVLRTIP SEVLTLEQLG APEIFKEIAA
TPRGIVLVTG PTGSGKSTTL AAMVDYKNST DYGHILTVED PIEFVHQSKK SLVSQREVHR
DTLSFTNALR AALREDPDTI LVGEMRDLET IRLALTAAET GHLVFGTLHT SSAPKTVDRI
VDAFPAAEKD MIRTMLSESL KAVISQVLLK KRGGGRVAVH EIMLGTGAIK NLIRENQVAQ
MYSSIQTGRK LGMQTLEQGL QECIQKGLIT REQAYEKANV KDQFK
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