Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1599 |
Symbol | |
ID | 4481567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 1974183 |
End bp | 1976174 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639722341 |
Product | secreted hydrolase-like protein |
Protein accession | YP_865514 |
Protein GI | 117924897 |
COG category | [R] General function prediction only |
COG ID | [COG5621] Predicted secreted hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000036978 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.453344 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATCCC TGTTCGGCTC TGCATCCCCA GCCTTTATTC TTATACAACT GGTCAACTAC ACCATTGCGG TCATTCTGTT GATCTACAGT TTTCGCACCG ATCGTCAGCT GTTCTGGACA CTGGTTGCGG GTATCTTAAT GGGCTTTGCC ATTGAGTATT CACAAACCTC CAAAGTTGAC CCACCCTATT ATTATAGCGA GGCCTTGGTA TGGCTGCCGG GCGGGGTACC CCTTGGGGTC GTGCTCAGCT GGGGTACCAT CTTTTTCTCA CTCTTTACCA CGCTGCGCCG CCTGGAACTT TCGCTATGGG TCATGGCACC CCTTGCGGGT TTCACCGCTA CCGTATTGGA CCTTGTCACC GATCCGGCCT TTGTCTCTAT TGGCTTTTGG GTCTGGAAAG TCCCTCCCGG TTGGTATGGC ATCCCGTGGA GCAACTACAT GGGGTGGTAC ATCATTGTCG CCGCCTTTGT GGCCTCTACC CAGTGGATGC TCAAACATTT CAAACCAGGG CAAGCTGGCC TGTTTTGGGA GATCGTGCGC GCTGTCTTAC CGGTGCCCAT CACCTTTGTC GCCTTTATTG GCCTGATGAC CGCCTATGTC TACCTGTTCC AGGAGCATCA TTGGGTACCG GAACAGTTGG TGGTTGGTGC CCTACTGCTG CTCACCGGTT GGCTGGCTGC GTGGCAACTG CGCCGTGCAG ACCGCAGCTG GCCGGTCAAT GCCTTTAGCC TTGTCACCCC TATCTTTTTG ATCATCACCA GTCTGCTGAT CTTGGTATTA TCCCCCCTGC ACACCACCTA TCCGACCTTG GCGGTGGTTA TGCCGGCCCT GTCCGCCCTG GTGCTGCTGG TCTACCTAAG CCCCTATTTG GACGTACTGC TAGGGCGCGT ACATCCCGCC GAACCCTGTG AAAAATGCGC CCACATTACA TGGTGGGCCA TTTTGGCGAC CCTGTTGATG GTGGTTTCTC TCTATTTTGG CTACCTTGCC CCCAAGCGGG GCTTGATCGG TCCCGTGGAG ATCCCCCAAA ATGATGCCTT TCTCCCGAAT GAGCAGGTGC AGTGGTGGTA TTGGACCGGC CATTTAAAGA CCGAAAGTGG CCGCGAATTT GGTTATGAAG TGGTCTTTTT CGCCTTCAAA ACGGGCCTGT TGATGCGTGA CCAGCTTATT CAAGCGGCCA TTACCGATGT GGAGGGGCAA AAGTTTCATT TTGGTCAAAA AGTTGTGCTT AAATTGCCAG AAATATTGGA CAGCAAATTT GACTTAACCA CTCAGGATGG CCTGAAGACC GGCAATATTG TGGTGACAGC CAAGGGTGGT GGTGGCCTAG ACCATCTGCA TGCCGAGGTA GACGGCTATG TGCTGGATGC CGAGTTAAAA GAGACCAAAC CGGTTGCCTT GCATTATGGT GGCGATGCCC ATCCCTATCG TTTCCAAGGG TATACCTACT ACTACTCCCG CCCTCATATG GAGACCACAG GCACCCTTAG CTACCAGGGG AAAACGGAGA AAATCACTGG TACCACTTGG TTTGATCGTC AATATGGTGA GCTCTATCAG GCCATTGTAA AAGGGTGGCA GTGGTTTGCT ATCGAGTTGG AAGATAACCG CCAGATCATG ATCTACGACA TTCTGGGTAA CGCCAATGAG GTTGAGCGGG CAGGCTCTTT AACCGGTGCC GATGGTATAA CCCGCGCCAT TTCCCGGTTT GACTTTGATG TGGAGATTTT GGGCGAGTGG ACCAGCCCCC ATACCAAGTG CACCTATCCT TCGGGATGGA AAGTCACGGT AGGGGATGAG GTCTTTACCA TCCTACCCCA AGTGAAGGAT CAAGAGCTGC GCGCGGTACA TGGCTATTGG GCCGGACCAG AGTATTGGGA AGGCACCAAC ACCGTGACCA GCGATAAAGT CAATGGGCGT GCCTATGTTG AGCTCAACGG CTACTGCCGA GGCATCGAAG GCACTTGGGG CATTCGCAAT AAAAAGAAGT AG
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Protein sequence | MESLFGSASP AFILIQLVNY TIAVILLIYS FRTDRQLFWT LVAGILMGFA IEYSQTSKVD PPYYYSEALV WLPGGVPLGV VLSWGTIFFS LFTTLRRLEL SLWVMAPLAG FTATVLDLVT DPAFVSIGFW VWKVPPGWYG IPWSNYMGWY IIVAAFVAST QWMLKHFKPG QAGLFWEIVR AVLPVPITFV AFIGLMTAYV YLFQEHHWVP EQLVVGALLL LTGWLAAWQL RRADRSWPVN AFSLVTPIFL IITSLLILVL SPLHTTYPTL AVVMPALSAL VLLVYLSPYL DVLLGRVHPA EPCEKCAHIT WWAILATLLM VVSLYFGYLA PKRGLIGPVE IPQNDAFLPN EQVQWWYWTG HLKTESGREF GYEVVFFAFK TGLLMRDQLI QAAITDVEGQ KFHFGQKVVL KLPEILDSKF DLTTQDGLKT GNIVVTAKGG GGLDHLHAEV DGYVLDAELK ETKPVALHYG GDAHPYRFQG YTYYYSRPHM ETTGTLSYQG KTEKITGTTW FDRQYGELYQ AIVKGWQWFA IELEDNRQIM IYDILGNANE VERAGSLTGA DGITRAISRF DFDVEILGEW TSPHTKCTYP SGWKVTVGDE VFTILPQVKD QELRAVHGYW AGPEYWEGTN TVTSDKVNGR AYVELNGYCR GIEGTWGIRN KKK
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