Gene Mmc1_1599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1599 
Symbol 
ID4481567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1974183 
End bp1976174 
Gene Length1992 bp 
Protein Length663 aa 
Translation table11 
GC content53% 
IMG OID639722341 
Productsecreted hydrolase-like protein 
Protein accessionYP_865514 
Protein GI117924897 
COG category[R] General function prediction only 
COG ID[COG5621] Predicted secreted hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000036978 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.453344 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCCC TGTTCGGCTC TGCATCCCCA GCCTTTATTC TTATACAACT GGTCAACTAC 
ACCATTGCGG TCATTCTGTT GATCTACAGT TTTCGCACCG ATCGTCAGCT GTTCTGGACA
CTGGTTGCGG GTATCTTAAT GGGCTTTGCC ATTGAGTATT CACAAACCTC CAAAGTTGAC
CCACCCTATT ATTATAGCGA GGCCTTGGTA TGGCTGCCGG GCGGGGTACC CCTTGGGGTC
GTGCTCAGCT GGGGTACCAT CTTTTTCTCA CTCTTTACCA CGCTGCGCCG CCTGGAACTT
TCGCTATGGG TCATGGCACC CCTTGCGGGT TTCACCGCTA CCGTATTGGA CCTTGTCACC
GATCCGGCCT TTGTCTCTAT TGGCTTTTGG GTCTGGAAAG TCCCTCCCGG TTGGTATGGC
ATCCCGTGGA GCAACTACAT GGGGTGGTAC ATCATTGTCG CCGCCTTTGT GGCCTCTACC
CAGTGGATGC TCAAACATTT CAAACCAGGG CAAGCTGGCC TGTTTTGGGA GATCGTGCGC
GCTGTCTTAC CGGTGCCCAT CACCTTTGTC GCCTTTATTG GCCTGATGAC CGCCTATGTC
TACCTGTTCC AGGAGCATCA TTGGGTACCG GAACAGTTGG TGGTTGGTGC CCTACTGCTG
CTCACCGGTT GGCTGGCTGC GTGGCAACTG CGCCGTGCAG ACCGCAGCTG GCCGGTCAAT
GCCTTTAGCC TTGTCACCCC TATCTTTTTG ATCATCACCA GTCTGCTGAT CTTGGTATTA
TCCCCCCTGC ACACCACCTA TCCGACCTTG GCGGTGGTTA TGCCGGCCCT GTCCGCCCTG
GTGCTGCTGG TCTACCTAAG CCCCTATTTG GACGTACTGC TAGGGCGCGT ACATCCCGCC
GAACCCTGTG AAAAATGCGC CCACATTACA TGGTGGGCCA TTTTGGCGAC CCTGTTGATG
GTGGTTTCTC TCTATTTTGG CTACCTTGCC CCCAAGCGGG GCTTGATCGG TCCCGTGGAG
ATCCCCCAAA ATGATGCCTT TCTCCCGAAT GAGCAGGTGC AGTGGTGGTA TTGGACCGGC
CATTTAAAGA CCGAAAGTGG CCGCGAATTT GGTTATGAAG TGGTCTTTTT CGCCTTCAAA
ACGGGCCTGT TGATGCGTGA CCAGCTTATT CAAGCGGCCA TTACCGATGT GGAGGGGCAA
AAGTTTCATT TTGGTCAAAA AGTTGTGCTT AAATTGCCAG AAATATTGGA CAGCAAATTT
GACTTAACCA CTCAGGATGG CCTGAAGACC GGCAATATTG TGGTGACAGC CAAGGGTGGT
GGTGGCCTAG ACCATCTGCA TGCCGAGGTA GACGGCTATG TGCTGGATGC CGAGTTAAAA
GAGACCAAAC CGGTTGCCTT GCATTATGGT GGCGATGCCC ATCCCTATCG TTTCCAAGGG
TATACCTACT ACTACTCCCG CCCTCATATG GAGACCACAG GCACCCTTAG CTACCAGGGG
AAAACGGAGA AAATCACTGG TACCACTTGG TTTGATCGTC AATATGGTGA GCTCTATCAG
GCCATTGTAA AAGGGTGGCA GTGGTTTGCT ATCGAGTTGG AAGATAACCG CCAGATCATG
ATCTACGACA TTCTGGGTAA CGCCAATGAG GTTGAGCGGG CAGGCTCTTT AACCGGTGCC
GATGGTATAA CCCGCGCCAT TTCCCGGTTT GACTTTGATG TGGAGATTTT GGGCGAGTGG
ACCAGCCCCC ATACCAAGTG CACCTATCCT TCGGGATGGA AAGTCACGGT AGGGGATGAG
GTCTTTACCA TCCTACCCCA AGTGAAGGAT CAAGAGCTGC GCGCGGTACA TGGCTATTGG
GCCGGACCAG AGTATTGGGA AGGCACCAAC ACCGTGACCA GCGATAAAGT CAATGGGCGT
GCCTATGTTG AGCTCAACGG CTACTGCCGA GGCATCGAAG GCACTTGGGG CATTCGCAAT
AAAAAGAAGT AG
 
Protein sequence
MESLFGSASP AFILIQLVNY TIAVILLIYS FRTDRQLFWT LVAGILMGFA IEYSQTSKVD 
PPYYYSEALV WLPGGVPLGV VLSWGTIFFS LFTTLRRLEL SLWVMAPLAG FTATVLDLVT
DPAFVSIGFW VWKVPPGWYG IPWSNYMGWY IIVAAFVAST QWMLKHFKPG QAGLFWEIVR
AVLPVPITFV AFIGLMTAYV YLFQEHHWVP EQLVVGALLL LTGWLAAWQL RRADRSWPVN
AFSLVTPIFL IITSLLILVL SPLHTTYPTL AVVMPALSAL VLLVYLSPYL DVLLGRVHPA
EPCEKCAHIT WWAILATLLM VVSLYFGYLA PKRGLIGPVE IPQNDAFLPN EQVQWWYWTG
HLKTESGREF GYEVVFFAFK TGLLMRDQLI QAAITDVEGQ KFHFGQKVVL KLPEILDSKF
DLTTQDGLKT GNIVVTAKGG GGLDHLHAEV DGYVLDAELK ETKPVALHYG GDAHPYRFQG
YTYYYSRPHM ETTGTLSYQG KTEKITGTTW FDRQYGELYQ AIVKGWQWFA IELEDNRQIM
IYDILGNANE VERAGSLTGA DGITRAISRF DFDVEILGEW TSPHTKCTYP SGWKVTVGDE
VFTILPQVKD QELRAVHGYW AGPEYWEGTN TVTSDKVNGR AYVELNGYCR GIEGTWGIRN
KKK