| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1589 |
|---|
| Symbol | |
|---|
| ID | 4482014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 1960723 |
|---|
| End bp | 1961580 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639722331 |
|---|
| Product | periplasmic nitrate reductase subunit NapH |
|---|
| Protein accession | YP_865504 |
|---|
| Protein GI | 117924887 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0348] Polyferredoxin |
|---|
| TIGRFAM ID | [TIGR02163] ferredoxin-type protein, NapH/MauN family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCC GTGCAGGGGT GGAGGCCATC CGTACCAGGG GCTGGTTGGC TGCGCACAAA
TGGCTACTCA TTCGCCGTGC GTCGCAGCTT ATGGTGTTTG CTCTCTTTTG GAGTGGGCCG
CTGTTGGGGC TGTGGATTGC GCGGGGCAAT CTCGCCTCAA GCACTTTGTT TGGGGTGATC
CCACTGAGTG ATCCCTTCAT TCAGTTGCAA TCGTGGGTGG CGGGCCATCC CCTGGCACAA
GATGCCCTGT TGGGCACAAG CTTGGTAACG CTGTTTTATA TGCTGGTTGG TGGACGGCTC
TTTTGTAGCT GGGTCTGTCC CCTCAATGTG GTCAGTGATT TTGCGGGCTG GTCGCGGCGC
CGTTTGGGTC TACGGGGTGG TTGGCGACCC AAACGCCACA CCCGCTATTT GGTGTTACTG
ATGGTGTTGG GGTTGGCTCT GGGCACCGGG CAGTTGGCTT GGGAGTTGGT TAATCCGGTC
AGCATGGTGC AGCGGGGTTT GATTTTTGGT TTCGGGTTTG CCTGGATGGC GGTGGCAGCA
CTGTTTTTAT GGGAGCTGCT GGTTAGTCCC CAGGGGTGGT GTGGTCGGCT TTGCCCCCAT
GGGGCCTTGT TTAGCCTGTT AGGGCGCTGG GCGCCCCTGC GCATTCACAC CCCAACCCGT
GAAAAATGTG ATGACTGTAT GGACTGTTAT CAGGTCTGTC CGGAACCTCA GGTGATTAAA
CCCGCCCTCA AGGGTGGGGA TGCCACCGTT CCCAGGATAG GCGAGATCAA CTGTACCAAC
TGTGGACGTT GTATTGATGT TTGCCCCCAA TCAATCTTTA CATTTGGGAT TAAAATTAAG
CCCTCAGAAA CAAGCTAA
|
|---|
| Protein sequence | MSRRAGVEAI RTRGWLAAHK WLLIRRASQL MVFALFWSGP LLGLWIARGN LASSTLFGVI
PLSDPFIQLQ SWVAGHPLAQ DALLGTSLVT LFYMLVGGRL FCSWVCPLNV VSDFAGWSRR
RLGLRGGWRP KRHTRYLVLL MVLGLALGTG QLAWELVNPV SMVQRGLIFG FGFAWMAVAA
LFLWELLVSP QGWCGRLCPH GALFSLLGRW APLRIHTPTR EKCDDCMDCY QVCPEPQVIK
PALKGGDATV PRIGEINCTN CGRCIDVCPQ SIFTFGIKIK PSETS
|
|---|
| |