| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1582 |
|---|
| Symbol | |
|---|
| ID | 4482007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 1950900 |
|---|
| End bp | 1951946 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639722324 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_865497 |
|---|
| Protein GI | 117924880 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4301] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR03438] probable methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00183608 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACTC AGCACGACGC CGCCACCCAC GGTTTTACCG CACACGCTTT GCGGGAGCTT
AGGGCGCAAC GCCCCCCGCA ATATGGCACG ATCCGGGGTT TTTATGATAC CCACCCCACT
TTAGCGGAAC TCAAGGCCGA AGTGCTGCAA GGTCTGGCCT GTACTCCCAA GCAGATTTCG
CCCAAATTTT TTTATGATGC CCAGGGCTCA AGACTGTTTG ATGCCATTAC CCAGCTGCCC
GAATATTACC CCACCCGAAC TGAAATCGAG CTTATCCGCC ACCATGGTGC CGAGATGGCT
CAATTGGCCG GCACAGGCTC GGTGTTGGTG GAGCTTGGCA GTGGCAGCAG TCTAAAGGTA
AGGCTGCTGT TAGAGGCTTT AAAACCTGCG GCCTATGTCC CCATAGATAT CTCCCGCCAA
CATTTGTTGG AGTCGGCAGA ATCTCTCGCC CAGAGCTTTC CTGACACAGC CGTTTTCCCC
GTTTGTGCCG ACTATTCTAA GGATTTCCAT CTACCCGCCA TTGAAGAGGA TGCCCCAAGG
CTGGCCTTTT TCCCAGGCTC AAGCATCGGC AATTTTGAAC CCCAGGATGC GATGGTACTA
TTGGAGCGTA TTGCCAAGCT GCTGGGTCCG GGGGGTGGGT TAATCATTGG GGTTGATCTG
CCCAAAGATC CCGCTGTACT GAATGCCGCT TATAATGATG CCCAGGGGGT TACGGCTCAG
TTTAACCTTA ATCTGCTCAC CCGCATTAAT CGCGAGGCTG CGGGCCATTT TCCCTTAGAA
AACTTTACCC ACCATGCCTT TTTTAATGAA AGCCTCAGCC GTATCGAGAT GCACTTAACC
AGTATTAAGG ATCAGACTAT CCCCGTTGGG GGGCGGCATT TCCAGTTTGC CAAGGGTGAG
CGCATCCATA CGGAGAGCTC CTATAAATAT GCCGTTACCG CTTTCCGGGA TCTGGCAAGC
CGTGCCGGTT TTCACTCCGA GGCGCTTTGG ATGGATGCCC AACAGCGGTT TAGCGTCCAT
TTTATGCGGG TGGGTAAAAG CAACTAA
|
|---|
| Protein sequence | MDTQHDAATH GFTAHALREL RAQRPPQYGT IRGFYDTHPT LAELKAEVLQ GLACTPKQIS
PKFFYDAQGS RLFDAITQLP EYYPTRTEIE LIRHHGAEMA QLAGTGSVLV ELGSGSSLKV
RLLLEALKPA AYVPIDISRQ HLLESAESLA QSFPDTAVFP VCADYSKDFH LPAIEEDAPR
LAFFPGSSIG NFEPQDAMVL LERIAKLLGP GGGLIIGVDL PKDPAVLNAA YNDAQGVTAQ
FNLNLLTRIN REAAGHFPLE NFTHHAFFNE SLSRIEMHLT SIKDQTIPVG GRHFQFAKGE
RIHTESSYKY AVTAFRDLAS RAGFHSEALW MDAQQRFSVH FMRVGKSN
|
|---|
| |