| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1572 |
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| Symbol | |
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| ID | 4484190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1936957 |
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| End bp | 1937640 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639722314 |
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| Product | hypothetical protein |
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| Protein accession | YP_865487 |
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| Protein GI | 117924870 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000828981 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGTGTG ATGTGCCCTT ACACCCATCG GCGGCGCAGG CTCTGCTGGC TTGGCAGGCG
CGGGTGGGGG AGCTCTTTAC CGTCTGCCAT GCGGGGTGTT TTTATCGGGC GCGTTTGCTG
GCTGATGGGC ACTCTATGCG GGTTTTTGCA ACCCTGAGCT ACTCTCCCGA ACCGCCAGCC
CCCCGTGTGT TGATGCAGGC CATGCCCAAC CGAGAACGCT TTTTATGGAT CTTGGAAAAG
GGGGTTGAGC TGGGTGCGAC GGCTATCTAT CCGGTGATCA CCGAAAAATC CTACCATGAA
GATGCCCCGG CATTGGCAAA ACAGGGGGGA TGGGTGCGTA TTCTACAGCG TGCCGCCCGC
CAGTGTCGAC GCGCTGTTTT GCCTAGGGTC GGTGAACCCC TGACGTTGGA GCAGGCCATC
GAACAGGGCG TGGGCATGGC CCAGTGGTAT CTGGATCTGT CGCCAACCCC CTTGCTGGGG
GAGCCTCTAC AGGGGGCTGT GCAACTGTTT GTGGGCCCAG AAGGGGGGTG GGGTGAGCAG
GATCTGGCGA TTTTTCGCGC AAGAGGGGTG GCACCACGCA ATCTTGGGCC GCGTTTGTTG
CGCACCGAAA CCGCCGCGCT GATGGCACTC TCTTGGATTG CCGCAGCAGA CAACCCTTTA
CATCCCGGCG AGGCTGGGAA ATAA
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| Protein sequence | MECDVPLHPS AAQALLAWQA RVGELFTVCH AGCFYRARLL ADGHSMRVFA TLSYSPEPPA
PRVLMQAMPN RERFLWILEK GVELGATAIY PVITEKSYHE DAPALAKQGG WVRILQRAAR
QCRRAVLPRV GEPLTLEQAI EQGVGMAQWY LDLSPTPLLG EPLQGAVQLF VGPEGGWGEQ
DLAIFRARGV APRNLGPRLL RTETAALMAL SWIAAADNPL HPGEAGK
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