Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1553 |
Symbol | |
ID | 4483149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 1913152 |
End bp | 1914108 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639722295 |
Product | ADP-glyceromanno-heptose 6-epimerase precursor |
Protein accession | YP_865468 |
Protein GI | 117924851 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.687648 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATATTG TAACAGGTGG TGCGGGTTTT ATTGGAGCCA ACATTGTGGC CCAGCTCAAT GCCCAAGGTA TTCGTGAAAT CCTGGTGGTG GACAATCTGG AAAAAGCGGA TAAATTTCTT AACCTACGCG ATTTAGAGAT CGCCGATTTT ATGGATAAAC GGGAGTTCCG CGAGCATCTG GAGCGGGACA TGTTTGTCAA CATGCCCATT CAGGCCATTT TCCATCAAGG CGCCTGCTCC GATACCATGG AGTATGATGG TCGCTATATG ATGGACAATA ACTTTACCTA CTCCAAGGTG CTGCTGCACC GGGCGGTGGA GTGGAAAGTG CCTTTTGTGT ATGCCTCCAG CGCGGCAACC TACGGAGCCA GCGCCCGCTT TGTCGAGTCA CCGGAAAATG AGCGCCCCCT CAATGTGTAT GGCTACTCCA AGCTGCTGTT TGACCGCTAT GTACAGCGCA ATATGAGCAA AATTGAGAGC ACCGTGGTGG GACTGCGCTA TTTTAATGTG TACGGCCCCC GTGAAGGGCA CAAAGGTAAA ATGGCCTCGC AAGCTTTTCA ATTGCGCAAC AAGGTGCTTG CCGATGGTGA GGCGAAGCTG TTTGAGGGCA CCAATGGCTA TGCCAACGGC GAGCAATCAC GCGATTTTAT CTTTGTTGAA GATGTGGCCC AGGTCAATCT GCATCTGGCC CACAGCAGCC AGCCGATCAA AGGGGTGTTT AACCTGGGTA CAGGTAAAAG CCGCAGCTTT AATGCCGTCG CCCAAGCGGT GATCCATAGC CTTGGCCAAG GCCGTATTGG CTACTTCCCC ATGCCCGCAG GCTTAAAAGA CAAATATCAA AACTTTACCC AAGCCGACAT GACCCTGTTC CGGGCGCAAA CCGGTTATAC CGCGCCTTTC ACCGAGCTAG AAGATGGGGT GAAAAAATAT ATGACGGCCT TACAGGAAAC CCCGTGA
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Protein sequence | MYIVTGGAGF IGANIVAQLN AQGIREILVV DNLEKADKFL NLRDLEIADF MDKREFREHL ERDMFVNMPI QAIFHQGACS DTMEYDGRYM MDNNFTYSKV LLHRAVEWKV PFVYASSAAT YGASARFVES PENERPLNVY GYSKLLFDRY VQRNMSKIES TVVGLRYFNV YGPREGHKGK MASQAFQLRN KVLADGEAKL FEGTNGYANG EQSRDFIFVE DVAQVNLHLA HSSQPIKGVF NLGTGKSRSF NAVAQAVIHS LGQGRIGYFP MPAGLKDKYQ NFTQADMTLF RAQTGYTAPF TELEDGVKKY MTALQETP
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